RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 IGHV1-2P23083 117 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 TMEM30BQ3MIR4 351 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 SIGLEC15Q6ZMC9 328 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 EXOC3-AS1Q8N2X6 119 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 TNFRSF14Q92956 283 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 RNF126Q9BV68 326 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 WFDC1Q9HC57 220 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 ZIC4Q8N9L1 334 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 ATAD5Q96QE3 1844 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 GUSBP1Q15486 140 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 RIPPLY2Q5TAB7 128 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 HIST1H2BLQ99880 126 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 USP54Q70EL1 1684 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 PSG1P11464 419 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 HOXB1P14653 301 aaPredicted RBP9.32□□□□□ -0.92
COL11A1-202ENST00000358392 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 LRP5O75197 1615 aa9.32□□□□□ -0.92
COL11A1-202ENST00000358392 PSCAO43653 123 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 UCP1P25874 307 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 PSG7Q13046 419 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
COL11A1-202ENST00000358392 RCHY1Q96PM5 261 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 TGFBR3LH3BV60 316 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 UPK2O00526 184 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
COL11A1-202ENST00000358392 SAP25Q8TEE9 199 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 A0A087WV48 116 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 EFNB3Q15768 340 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.31□□□□□ -0.92
COL11A1-202ENST00000358392 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 MPDZO75970 2070 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 ZNF319Q9P2F9 582 aa9.31□□□□□ -0.92
COL11A1-202ENST00000358392 COL11A1P12107 1806 aaPredicted RBP9.3□□□□□ -0.92
COL11A1-202ENST00000358392 RP1L1Q8IWN7 2480 aaPredicted RBP9.3□□□□□ -0.92
COL11A1-202ENST00000358392 TIMP3P35625 211 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
COL11A1-202ENST00000358392 NDPQ00604 133 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 TMEM219Q86XT9 240 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 LAIR2Q6ISS4 152 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 LCN12Q6JVE5 192 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 TMEM238C9JI98 176 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 SMKR1H3BMG3 65 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 ZNF876PQ49A33 203 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 SSC4DQ8WTU2 575 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 UBE2CO00762 179 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 SRSF7Q16629 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
COL11A1-202ENST00000358392 IGFL4Q6B9Z1 124 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 FAM181AQ8N9Y4 354 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 CACNG8Q8WXS5 425 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 F5P12259 2224 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 PRB1P04280 392 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
COL11A1-202ENST00000358392 TRGV11A0A075B6L2 103 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 C5orf67F2Z3F1 127 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 A0A087WX48 190 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 F8WEM9 126 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 TMEM144Q7Z5S9 345 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 PPP1R32Q7Z5V6 425 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 SLC50A1Q9BRV3 221 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 TRGV1A0A0A0MS02 117 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 MYOD1P15172 320 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 GGTLC1Q9BX51 225 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 FOXD3Q9UJU5 478 aaPredicted RBP9.29□□□□□ -0.92
COL11A1-202ENST00000358392 PMS2P5A8MQ11 134 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 SAP30O75446 220 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 SEC11AP67812 179 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 PSG3Q16557 428 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 MORN2Q502X0 79 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 FAM90A2PQ658T7 463 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 COLQQ9Y215 455 aaPredicted RBP9.29□□□□□ -0.92
COL11A1-202ENST00000358392 ZNF138P52744 262 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 PAX8Q06710 450 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 HEPN1Q6WQI6 88 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 NR2C2APQ86WQ0 139 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 LINC00312Q9Y6C7 94 aa9.29□□□□□ -0.92
COL11A1-202ENST00000358392 AMBPP02760 352 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 SP9P0CG40 484 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 OSTCQ9NRP0 149 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 RPUSD1Q9UJJ7 312 aaKnown RBP9.28□□□□□ -0.92
COL11A1-202ENST00000358392 RFNGQ9Y644 331 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 CHCHD2Q9Y6H1 151 aaPredicted RBP9.28□□□□□ -0.92
COL11A1-202ENST00000358392 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 NEU4Q8WWR8 484 aaPredicted RBP9.28□□□□□ -0.92
COL11A1-202ENST00000358392 FER1L5A0AVI2 2057 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 MLNRO43193 412 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 LYZL1Q6UWQ5 148 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 TSKUQ8WUA8 353 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
COL11A1-202ENST00000358392 BMPERQ8N8U9 685 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 ZNF114Q8NC26 417 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 MGST2Q99735 147 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 TRAV40A0A0B4J280 105 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 C9JAW5 83 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms