RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 IGHV7-4-1A0A0J9YVY3 117 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 SERTM2A0A1B0GWG4 89 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 CXCL2P19875 107 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 CRIP2P52943 208 aaPredicted RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 RRN3P1Q2M238 152 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 BAP18Q8IXM2 172 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 ZNF502Q8TBZ5 544 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 POLEQ07864 2286 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 CTXND1A0A1B0GTU2 59 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 LGALS9O00182 355 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 CRYGBP07316 175 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 GPHB5Q86YW7 130 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 SCARB1Q8WTV0 552 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 RITA1Q96K30 269 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 RSG1Q9BU20 258 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 C15orf62A8K5M9 175 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 K7EMT4 169 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 BTCP35070 178 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 ZNF343Q6P1L6 599 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 KCNRGQ8N5I3 272 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 LINC00205P59089 165 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 IGLC7A0M8Q6 106 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 BRI3O95415 125 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 C1orf229Q6ZS94 237 aaPredicted RBP7.2□□□□□ -1.26
UPF2-202ENST00000357604 ZNF767PQ75MW2 155 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 IL17DQ8TAD2 202 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 NIPSNAP3BQ9BS92 247 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 FUT9Q9Y231 359 aa7.2□□□□□ -1.26
UPF2-202ENST00000357604 RUNX1Q01196 453 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 TCTEX1D4Q5JR98 221 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 KCNIP4Q6PIL6 250 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 NPCDR1Q9BY65 106 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 WDR61Q9GZS3 305 aaKnown RBP7.19□□□□□ -1.26
UPF2-202ENST00000357604 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 IGHV4OR15-8A0A075B7B6 117 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 A0A087WW49 117 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 MAP1LC3B2A6NCE7 125 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 MIC13Q5XKP0 118 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 NEURL2Q9BR09 285 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 TCEAL7Q9BRU2 100 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 PARD6GQ9BYG4 376 aaPredicted RBP7.19□□□□□ -1.26
UPF2-202ENST00000357604 MAP1LC3BQ9GZQ8 125 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 TANC2Q9HCD6 1990 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 GP9P14770 177 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 C15orf54Q8N8G6 183 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 PHYHIPLQ96FC7 376 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 SPAG8Q99932 426 aaPredicted RBP7.19□□□□□ -1.26
UPF2-202ENST00000357604 CACNA1CQ13936 2221 aa7.19□□□□□ -1.26
UPF2-202ENST00000357604 TEX22C9J3V5 150 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 CD81P60033 236 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 MORN3Q6PF18 240 aaPredicted RBP7.18□□□□□ -1.26
UPF2-202ENST00000357604 TREML4Q6UXN2 200 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 TXNDC17Q9BRA2 123 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 OR5AC2Q9NZP5 309 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
UPF2-202ENST00000357604 IGHV3-66A0A0C4DH42 116 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 SLURP1P55000 103 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 OR4B1Q8NGF8 309 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 PLSCR3Q9NRY6 295 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 ZNF292O60281 2723 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 SPTBN4Q9H254 2564 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 IGHV3-35A0A0C4DH35 117 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 SEC11BP0C7V7 166 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 S100PP25815 95 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 TMEM14EPQ6UXP3 125 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 THAP8Q8NA92 274 aa7.18□□□□□ -1.26
UPF2-202ENST00000357604 A0A1B0GV50 99 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 IGSF23A1L1A6 192 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 SYT8Q8NBV8 401 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 MRAPQ8TCY5 172 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 IGLV2-14P01704 120 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 PSMB8P28062 276 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 WT1-ASQ06250 92 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 EIF4EBP1Q13541 118 aaPredicted RBP7.17□□□□□ -1.26
UPF2-202ENST00000357604 C5orf30Q96GV9 206 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 IGLV1-40P01703 118 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 PSG1P11464 419 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 HIST1H1AQ02539 215 aaPredicted RBP7.17□□□□□ -1.26
UPF2-202ENST00000357604 NHLH2Q02577 135 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 KRTAP24-1Q3LI83 254 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 OR11H7Q8NGC8 314 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 LHFPL5Q8TAF8 219 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 LAMA3Q16787 3333 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 TEX48A0A1B0GUV7 120 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 IGKV1-39P01597 117 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 IGKV1D-39P04432 117 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 AMY1AP04745 511 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 OR5I1Q13606 314 aa7.17□□□□□ -1.26
UPF2-202ENST00000357604 MFSD2BA6NFX1 497 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 LURAP1LQ8IV03 231 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 SERTAD4Q9NUC0 356 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 MED9Q9NWA0 146 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 IGHV3-48P01763 117 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 S100A4P26447 101 aaKnown RBP7.16□□□□□ -1.26
UPF2-202ENST00000357604 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 OTORQ9NRC9 128 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 C5orf42Q9H799 3197 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 SMLR1H3BR10 107 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 MGST1P10620 155 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms