RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 TPTE2P1Q5T6R2 138 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 C5orf30Q96GV9 206 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 OR11H12B2RN74 326 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 DOCK5Q9H7D0 1870 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 CFHR2P36980 270 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 JPT2Q9H910 190 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 TRIP12Q14669 1992 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 NAPSAO96009 420 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 SERF2P84101 59 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 PRADC1Q9BSG0 188 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 FOXD3Q9UJU5 478 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 IGKV1-5P01602 117 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF414Q96IQ9 312 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 CDK2AP2O75956 126 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 WISP3O95389 354 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 SUMO4Q6EEV6 95 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 RBM38Q9H0Z9 239 aaKnown RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 LAMTOR3Q9UHA4 124 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 ITGB4P16144 1822 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 TRAV26-2A0A0B4J265 109 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 IFI27P40305 119 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 SURF2Q15527 256 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 LAIR2Q6ISS4 152 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 OR11H1Q8NG94 326 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 RHPN1-AS1Q9BWJ2 59 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV1-8P0DP01 117 aa6.02□□□□□ -1.45
VPS13A-202ENST00000357409 ALX4Q9H161 411 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-202ENST00000357409 SLC25A20O43772 301 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 RIPPLY2Q5TAB7 128 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 B4DSR2 109 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 H3BUT2 72 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 COTL1Q14019 142 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 MDS2Q8NDY4 140 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 PRSS33Q8NF86 280 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 OR11H2Q8NH07 326 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 CACNG8Q8WXS5 425 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 LINC00312Q9Y6C7 94 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 EDA2RQ9HAV5 297 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 TRBV5-7A0A0A0MS05 114 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 KNTC1P50748 2209 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 SLC25A15Q9Y619 301 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 WISP2O76076 250 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 CSRP1P21291 193 aaKnown RBP6.01□□□□□ -1.45
VPS13A-202ENST00000357409 DERL1Q9BUN8 251 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 MEGF9Q9H1U4 602 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 A0A1B0GTI1 187 aa6.01□□□□□ -1.45
VPS13A-202ENST00000357409 CHTOPQ9Y3Y2 248 aaKnown RBP6.01□□□□□ -1.45
VPS13A-202ENST00000357409 NTN3O00634 580 aaPredicted RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 IGKV1-16P04430 117 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 TIMP3P35625 211 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 LIME1Q9H400 295 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 LRCOL1A6NCL2 159 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 ATP6V0E1O15342 81 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 HLA-DQA1P01909 254 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 ATRAIDQ6UW56 229 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 GGNQ86UU5 652 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 LINC01356Q8N9X3 169 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 ALKBH7Q9BT30 221 aaPredicted RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 IGKV1-27A0A075B6S5 117 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 SERF1AO75920 110 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 SCAND1P57086 179 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 SPRNQ5BIV9 151 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 ZNRF2Q8NHG8 242 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 SMIM8Q96KF7 97 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 IL36BQ9NZH7 164 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 CNTRLQ7Z7A1 2325 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 PCNTO95613 3336 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF114Q8NC26 417 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 EPDR1Q9UM22 224 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 ZNFX1Q9P2E3 1918 aaKnown RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 hDV102S1A0JD36 115 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 DAD1P61803 113 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 CLPPQ16740 277 aaPredicted RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 RPL23P62829 140 aaKnown RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 SLC25A34Q6PIV7 304 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 IGKV2D-24A0A075B6R9 120 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 BUB1B-PAK6H3BSN5 160 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 C20orf204Q6ZNR8 217 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 NIT1Q86X76 327 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 OSR1Q8TAX0 266 aaPredicted RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 RCC1LQ96I51 464 aaKnown RBP6□□□□□ -1.45
VPS13A-202ENST00000357409 C8orf49Q96NF6 230 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 TIMM17AQ99595 171 aa6□□□□□ -1.45
VPS13A-202ENST00000357409 A0A1B0GUT8 65 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 MSMBP08118 114 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 NMBP08949 121 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 HOXB1P14653 301 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-202ENST00000357409 HOXB4P17483 251 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-202ENST00000357409 DEFB112Q30KQ8 113 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 ORAOV1Q8WV07 137 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 A0A0G2JRQ6 117 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 TPSG1Q9NRR2 321 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 EFNB3Q15768 340 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 LYZL1Q6UWQ5 148 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 TJP1Q07157 1748 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 CA7P43166 264 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 TEX29Q8N6K0 151 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGLV10-54A0A075B6I4 117 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms