RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SPRY3O43610 288 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PPIAL4FP0DN26 164 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PPIAL4AQ9Y536 164 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 WNT2P09544 360 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 DDB2Q92466 427 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 EEF1AKMT3Q96AZ1 226 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 C16orf92Q96LL3 132 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV2OR16-5A0A0B4J2B6 119 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 MRAP2Q96G30 205 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 C21orf62Q9NYP8 219 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF492Q9P255 531 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 COL11A2P13942 1736 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-202ENST00000357162 TRAV8-4A0A0B4J246 113 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PROB1E7EW31 1015 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 K7EP34 96 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 NKX2-8O15522 239 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 GAS1P54826 345 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PRR7Q8TB68 274 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 DMRTA2Q96SC8 542 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 TRGV11A0A075B6L2 103 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 TRAV8-6A0A0B4J262 113 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 H3BMM0 161 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 MAGEA5P43359 124 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF83P51522 516 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 EGR4Q05215 589 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 NEU1Q99519 415 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 MSGN1A6NI15 193 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 LEPP41159 167 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 SUMO2P61956 95 aaKnown RBP5.52□□□□□ -1.53
VPS13B-202ENST00000357162 DYNLRB2Q8TF09 96 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 UTF1Q5T230 341 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 WNT10AQ9GZT5 417 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 AURKAIP1Q9NWT8 199 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-202ENST00000357162 CCL3P10147 92 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PRSS41Q7RTY9 318 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 ZAR1Q86SH2 424 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 SLX1AQ9BQ83 275 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 UBE2L6O14933 153 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 ACYP1P07311 99 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 CD69Q07108 199 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 KLF12Q9Y4X4 402 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 SHISA3A0PJX4 238 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 IL17RELQ6ZVW7 336 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 C8orf46Q8TAG6 207 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 ABHD17AQ96GS6 310 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 FAM60AQ9NP50 221 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 CCL11P51671 97 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 YPEL3P61236 119 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-202ENST00000357162 SSBP2P81877 361 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-202ENST00000357162 ASCL4Q6XD76 172 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 MED19A0JLT2 244 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-202ENST00000357162 PDLIM4P50479 330 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 SP7Q8TDD2 431 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-202ENST00000357162 DEFB127Q9H1M4 99 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 EFNB3Q15768 340 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM42Q69YG0 159 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 OR11H6Q8NGC7 330 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 Q9H3A6 140 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM160Q9NX00 188 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 IL18BPO95998 194 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 GFRALQ6UXV0 394 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 SMIM20Q8N5G0 67 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 FOXC2Q99958 501 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 EPDR1Q9UM22 224 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 ERG28Q9UKR5 140 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 A0A0J9YW62 118 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 C9orf118A6NHY6 69 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 NTN1O95631 604 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 LTBP1Q14766 1721 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV3-15A0A0B4J1V0 119 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 H0YIZ8 118 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 SRD5A1P18405 259 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM170BQ5T4T1 132 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF841Q6ZN19 808 aa5.51□□□□□ -1.53
VPS13B-202ENST00000357162 C12orf77C9JDV5 145 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 FAM159AQ6UWV7 190 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 CRPP02741 224 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF48Q96MX3 618 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV1-45A0A0A0MS14 117 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 GREM1O60565 184 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 SLC25A16P16260 332 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 HGFACQ04756 655 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 Q6ZVH6 145 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 COQ2Q96H96 371 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 CYTL1Q9NRR1 136 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 DPM3Q9P2X0 92 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 KHDC1LQ5JSQ8 128 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 CXorf67Q86X51 503 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 HELZ2Q9BYK8 2649 aaKnown RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 CST9LQ9H4G1 147 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 C11orf52Q96A22 123 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 WFDC6Q9BQY6 131 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 E9PQ18 207 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 NDUFB8O95169 186 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 MOSP00540 346 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 COL9A1P20849 921 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 F11RQ9Y624 299 aaKnown RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 LOC389332A0A1B0GUA5 103 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 UCN2Q96RP3 112 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms