RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ERHP84090 104 aaKnown RBP5.47□□□□□ -1.53
VPS13A-201ENST00000355766 CLINT1Q14677 625 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 PRSS8Q16651 343 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 PXDC1Q5TGL8 231 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 SSX9Q7RTT3 188 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 PPP1R27Q86WC6 154 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 VKORC1L1Q8N0U8 176 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 Q8N6K4 173 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 SCGB1C1Q8TD33 95 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 WFDC1Q9HC57 220 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 SIRT7Q9NRC8 400 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 KIAA1456Q9P272 454 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 SIGLEC9Q9Y336 463 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.53
VPS13A-201ENST00000355766 TEX50A0A1B0GTY4 177 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 A0A1B0GW64 132 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 MFSD2BA6NFX1 497 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 ZNF705EA8MWA4 302 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-201ENST00000355766 KRBOX1C9JBD0 128 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 H3BP45 60 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 NBR2O15453 112 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 CYB5BO43169 146 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 IFNA10P01566 189 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 HBE1P02100 147 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 SNRNP70P08621 437 aaKnown RBP5.46□□□□□ -1.54
VPS13A-201ENST00000355766 ATP6V0CP27449 155 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 TAGLN2P37802 199 aaKnown RBP5.46□□□□□ -1.54
VPS13A-201ENST00000355766 SNCAP37840 140 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 IER3P46695 156 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 REG1BP48304 166 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 RAB2AP61019 212 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM267Q0VDI3 215 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-201ENST00000355766 RAB31Q13636 194 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 PMS2P11Q13670 270 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 PSG5Q15238 335 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 ETFRF1Q6IPR1 90 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 SLC25A24Q6NUK1 477 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 MOB3BQ86TA1 216 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 HAPLN4Q86UW8 402 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 COMMD7Q86VX2 200 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM217Q8N7C4 229 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 OR1P1Q8NH06 330 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM190Q8WZ59 177 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM68Q96MH6 324 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 SMIM3Q9BZL3 60 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 ZNF430Q9H8G1 570 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-201ENST00000355766 ZNRD1Q9P1U0 126 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 WDR83OSQ9Y284 106 aa5.46□□□□□ -1.54
VPS13A-201ENST00000355766 LSM4Q9Y4Z0 139 aaKnown RBP5.46□□□□□ -1.54
VPS13A-201ENST00000355766 TET2Q6N021 2002 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-201ENST00000355766 TRAV3A0A0B4J244 114 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 IGHV1-69DA0A0B4J2H0 117 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 A0A0U1RQK1 487 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 M0QZK8 103 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 NPFFO15130 113 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 SLC25A17O43808 307 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 IGHV1-69P01742 117 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 HLA-DRB1P01911 266 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 SAA4P35542 130 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 OPRK1P41145 380 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 RPL27AP46776 148 aaKnown RBP5.45□□□□□ -1.54
VPS13A-201ENST00000355766 DIAPH2-AS1Q14236 149 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 C5orf64Q2M2E5 130 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 KLK9Q2XQG4 91 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 AKR1C8PQ5T2L2 129 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 C16orf82Q7Z2V1 217 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 ZNF709Q8N972 641 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 HSD17B11Q8NBQ5 300 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 RBMXL1Q96E39 390 aaKnown RBP5.45□□□□□ -1.54
VPS13A-201ENST00000355766 NPCDR1Q9BY65 106 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 NPVFQ9HCQ7 196 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 METTL1Q9UBP6 276 aaKnown RBP5.45□□□□□ -1.54
VPS13A-201ENST00000355766 ZNF580Q9UK33 172 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 VPREB3Q9UKI3 123 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 KLK9Q9UKQ9 250 aa5.45□□□□□ -1.54
VPS13A-201ENST00000355766 DNAH1Q9P2D7 4330 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 CENPVL3A0A0U1RRI6 287 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 UBE2L5PA0A1B0GUS4 154 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 IGLC7A0M8Q6 106 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 NPIPB5A8MRT5 1133 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 C3orf84H3BNL1 204 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 NXPH3O95157 252 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 IGKV1D-33P01593 117 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 IGKV1-33P01594 117 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 PRH1P02810 166 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 IFNA4P05014 189 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 RNASE2P10153 161 aaKnown RBP5.44□□□□□ -1.54
VPS13A-201ENST00000355766 ZP3P21754 424 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 CAMLGP49069 296 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 ARL16Q0P5N6 197 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 PJVKQ0ZLH3 352 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 MMDQ15546 238 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 MRGPRG-AS1Q2M3A8 158 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM41BQ5BJD5 291 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 FAM74A1Q5RGS3 127 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 LDLRAD2Q5SZI1 272 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 OR8G2PQ6IF36 304 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 BTNL8Q6UX41 500 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 ZNF562Q6V9R5 426 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms