RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 GATA2P23769 480 aaPredicted RBP10.67□□□□□ -0.7
HOXA1-202ENST00000355633 RBMS3Q6XE24 437 aaKnown RBP10.67□□□□□ -0.7
HOXA1-202ENST00000355633 TRGV9Q99603 122 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 SLC25A22Q9H936 323 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 CLN5O75503 358 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 HBE1P02100 147 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 SELENOTP62341 195 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 DEFA5Q01523 94 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 ZNF90Q03938 601 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 SPSB3Q6PJ21 355 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 SSX7Q7RTT5 188 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 NOL4LQ96MY1 436 aaPredicted RBP10.67□□□□□ -0.7
HOXA1-202ENST00000355633 GSX1Q9H4S2 264 aaPredicted RBP10.67□□□□□ -0.7
HOXA1-202ENST00000355633 S4R3C0 116 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 MYO9AB2RTY4 2548 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 TRBV9A0A0B4J1U6 114 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 A0A1W2PPV4 95 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 RAB19A4D1S5 217 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 TSPAN4O14817 238 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 NPBWR1P48145 328 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 CDC34P49427 236 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-202ENST00000355633 MFAP4P55083 255 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 RHOGP84095 191 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 DUX5Q96PT3 197 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 C21orf62Q9NYP8 219 aa10.66□□□□□ -0.7
HOXA1-202ENST00000355633 MAP1LC3B2A6NCE7 125 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 LY6G6DO95868 133 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 SCGB2A2Q13296 93 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 EIF4E3Q8N5X7 224 aaKnown RBP10.65□□□□□ -0.7
HOXA1-202ENST00000355633 COMMD1Q8N668 190 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 NECAP1Q8NC96 275 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 VN1R17PQ8TDU5 208 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 MS4A10Q96PG2 267 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 PRSS22Q9GZN4 317 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 NPFFR1Q9GZQ6 430 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 MAP1LC3BQ9GZQ8 125 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 ZNF580Q9UK33 172 aa10.65□□□□□ -0.7
HOXA1-202ENST00000355633 TRAV1-1A0A0B4J248 108 aa10.65□□□□□ -0.71
HOXA1-202ENST00000355633 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.71
HOXA1-202ENST00000355633 GNG7O60262 68 aa10.65□□□□□ -0.71
HOXA1-202ENST00000355633 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.71
HOXA1-202ENST00000355633 PPIFP30405 207 aaKnown RBP10.65□□□□□ -0.71
HOXA1-202ENST00000355633 C15orf32Q32M92 178 aa10.65□□□□□ -0.71
HOXA1-202ENST00000355633 Q56UQ5 140 aa10.65□□□□□ -0.71
HOXA1-202ENST00000355633 RAB24Q969Q5 203 aa10.65□□□□□ -0.71
HOXA1-202ENST00000355633 I3L521 148 aa10.64□□□□□ -0.71
HOXA1-202ENST00000355633 HMGB3O15347 200 aaKnown RBP10.64□□□□□ -0.71
HOXA1-202ENST00000355633 IGHV3-23P01764 117 aa10.64□□□□□ -0.71
HOXA1-202ENST00000355633 FGF8P55075 233 aaPredicted RBP10.64□□□□□ -0.71
HOXA1-202ENST00000355633 CCL20P78556 96 aa10.64□□□□□ -0.71
HOXA1-202ENST00000355633 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
HOXA1-202ENST00000355633 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 TRAV30A0A087WSZ9 112 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 H3BUA1 57 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 SCO1O75880 301 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 RHOBP62745 196 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 TIGITQ495A1 244 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 TXN2Q99757 166 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 C19orf24Q9BVV8 132 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 ACANP16112 2415 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 DNAJC9-AS1A6NH13 148 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 F8W735 103 aaPredicted RBP10.63□□□□□ -0.71
HOXA1-202ENST00000355633 IGKV1-17P01599 117 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 FABP1P07148 127 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 CD99P14209 185 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 FAM78BQ5VT40 261 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 UQCC3Q6UW78 93 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 OR1L4Q8NGR5 311 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 ZNF702PQ9H963 129 aa10.63□□□□□ -0.71
HOXA1-202ENST00000355633 SEPSECSQ9HD40 501 aaKnown RBP10.63□□□□□ -0.71
HOXA1-202ENST00000355633 PSMB11A5LHX3 300 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 COX7A2P2O60397 106 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 SCGB2A1O75556 95 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 BRI3O95415 125 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 TRGV3P03979 118 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 PSG1P11464 419 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 SRD5A1P18405 259 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 FCGR2BP31994 310 aaPredicted RBP10.62□□□□□ -0.71
HOXA1-202ENST00000355633 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 ZNF502Q8TBZ5 544 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 GATAD1Q8WUU5 269 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 PFDN5Q99471 154 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 PBDC1Q9BVG4 233 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 DOK5Q9P104 306 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 NOTCH2Q04721 2471 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 ZNF98A6NK75 572 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 OR5G3P0C626 314 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 RD3LP0DJH9 198 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 TPPP2P59282 170 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 CFHR3Q02985 330 aa10.62□□□□□ -0.71
HOXA1-202ENST00000355633 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms