RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 FAM90A9PA6NNJ1 464 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 PRB4P10163 310 aaPredicted RBP14.9□□□□□ -0.02
COL18A1-202ENST00000355480 C10orf55Q5SWW7 151 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 TMEM178BH3BS89 294 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 SRSF1Q07955 248 aaKnown RBP eCLIP14.9□□□□□ -0.022e-8■■■□□ 17.8
COL18A1-202ENST00000355480 EFNB3Q15768 340 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 UBE2DNLQ8IWF7 75 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 OR9G4Q8NGQ1 327 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 IGKV1-12A0A0C4DH73 117 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 SLC25A20O43772 301 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 IGKV1D-12P01611 117 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 BRD3OSQ6XYD6 125 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 CYB5R2Q6BCY4 276 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 LHFPL4Q7Z7J7 247 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 A0A0G2JNJ9 132 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 ZNF815PA8K554 130 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 ERVK11-1P61568 191 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 C10orf126Q8N4M7 172 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 BEND2Q8NDZ0 799 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 Q9UFV3 132 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 IGKV1D-8A0A087WSZ0 117 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 A0A087WWC5 75 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 CD28P10747 220 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 Q0VFX4 171 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 MBNL3Q9NUK0 354 aaKnown RBP14.89□□□□□ -0.03
COL18A1-202ENST00000355480 CYSLTR1Q9Y271 337 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 TPTE2P1Q5T6R2 138 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 HEPN1Q6WQI6 88 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 SLC25A15Q9Y619 301 aa14.89□□□□□ -0.03
COL18A1-202ENST00000355480 SDK2Q58EX2 2172 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 H3BUX3 64 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 NABP1Q96AH0 204 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 IGHV1-3A0A0C4DH29 117 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 DEFB121Q5J5C9 76 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 A0A1B0GWB2 263 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 MST1P26927 711 aa14.88□□□□□ -0.03
COL18A1-202ENST00000355480 EVI2AP22794 236 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 ID3Q02535 119 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 SPTBN2O15020 2390 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 ZNF236Q9UL36 1845 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 CMC4P56277 68 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-202ENST00000355480 RPL15P61313 204 aaKnown RBP14.87□□□□□ -0.03
COL18A1-202ENST00000355480 COQ2Q96H96 371 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 SCN8AQ9UQD0 1980 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 PSME4Q14997 1843 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 TRAV5A0A0B4J249 113 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 ADARB2-AS1A8MUL3 147 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 MINOS1Q5TGZ0 78 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 MINOS1-NBL1R4GNA1 71 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 ARID2Q68CP9 1835 aa14.87□□□□□ -0.03
COL18A1-202ENST00000355480 NPIPB5A8MRT5 1133 aa14.86□□□□□ -0.03
COL18A1-202ENST00000355480 SERF1AO75920 110 aa14.86□□□□□ -0.03
COL18A1-202ENST00000355480 TYMSP04818 313 aa14.86□□□□□ -0.03
COL18A1-202ENST00000355480 RNF182Q8N6D2 247 aa14.86□□□□□ -0.03
COL18A1-202ENST00000355480 OSTCQ9NRP0 149 aa14.86□□□□□ -0.03
COL18A1-202ENST00000355480 WDR83OSQ9Y284 106 aa14.86□□□□□ -0.03
COL18A1-202ENST00000355480 C19orf67A6NJJ6 358 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 PRDM13Q9H4Q3 707 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 NAPSAO96009 420 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 HBDP02042 147 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 LINC00614P0C842 121 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 CD177Q8N6Q3 437 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 NXT2Q9NPJ8 142 aaKnown RBP14.85□□□□□ -0.03
COL18A1-202ENST00000355480 CNOT1A5YKK6 2376 aaKnown RBP14.85□□□□□ -0.03
COL18A1-202ENST00000355480 IGKV2-40A0A087WW87 121 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-202ENST00000355480 PSPNO60542 156 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 IGKV2D-40P01614 121 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-202ENST00000355480 SRSF6Q13247 344 aaKnown RBP14.85□□□□□ -0.03
COL18A1-202ENST00000355480 C17orf82Q86X59 251 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-202ENST00000355480 BTCP35070 178 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 ADMP35318 185 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 ORMDL2Q53FV1 153 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 GHRHP01286 108 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 PRADC1Q9BSG0 188 aa14.85□□□□□ -0.03
COL18A1-202ENST00000355480 PGPEP1LA6NFU8 196 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 PMS2P5A8MQ11 134 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 J3QRE1 110 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 PPBPP02775 128 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 LINC00518Q8N0U6 118 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 OOSP1A8MZH6 123 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 F2Z2F3 143 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 MDS2Q8NDY4 140 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 NRN1Q9NPD7 142 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 A0A087WX48 190 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 TRAV12-3A0A0B4J271 114 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 OCC1Q8TAD7 63 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 RCHY1Q96PM5 261 aa14.84□□□□□ -0.03
COL18A1-202ENST00000355480 PSG1P11464 419 aa14.83□□□□□ -0.03
COL18A1-202ENST00000355480 LY6G6FQ5SQ64 297 aa14.83□□□□□ -0.03
COL18A1-202ENST00000355480 TREML4Q6UXN2 200 aa14.83□□□□□ -0.03
COL18A1-202ENST00000355480 IGKV1-27A0A075B6S5 117 aa14.83□□□□□ -0.04
COL18A1-202ENST00000355480 ZNF688P0C7X2 276 aa14.83□□□□□ -0.04
COL18A1-202ENST00000355480 RALGAPA1Q6GYQ0 2036 aa14.83□□□□□ -0.04
COL18A1-202ENST00000355480 H0YIZ8 118 aa14.83□□□□□ -0.04
COL18A1-202ENST00000355480 RPL35AP18077 110 aaKnown RBP14.83□□□□□ -0.04
COL18A1-202ENST00000355480 DPM2O94777 84 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 SRSF7Q16629 238 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■■□ 25.7
COL18A1-202ENST00000355480 A8MXK9 166 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 GFI1Q99684 422 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 VSIRQ9H7M9 311 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms