RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 OR10J1P30954 320 aa16.9■□□□□ 0.3
SHMT1-203ENST00000354098 RCC1LQ96I51 464 aaKnown RBP16.9■□□□□ 0.3
SHMT1-203ENST00000354098 MBD2Q9UBB5 411 aa16.9■□□□□ 0.3
SHMT1-203ENST00000354098 EDN2P20800 178 aa16.89■□□□□ 0.29
SHMT1-203ENST00000354098 P2RY1P47900 373 aa16.89■□□□□ 0.29
SHMT1-203ENST00000354098 IL34Q6ZMJ4 242 aa16.89■□□□□ 0.29
SHMT1-203ENST00000354098 TMEM217Q8N7C4 229 aa16.89■□□□□ 0.29
SHMT1-203ENST00000354098 IGKV1OR2-108A0A075B7D4 117 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 TRAV30A0A087WSZ9 112 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 SEC14L6B5MCN3 397 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 LGALS9O00182 355 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 PET100P0DJ07 73 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 RELQ04864 619 aaPredicted RBP16.88■□□□□ 0.29
SHMT1-203ENST00000354098 REC114Q7Z4M0 266 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 IGKV1D-37A0A075B6S9 117 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 NDUFA4O00483 81 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 YIF1AO95070 293 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 SULT1A1P50225 295 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 TM4SF20Q53R12 229 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 OR1S2Q8NGQ3 325 aa16.88■□□□□ 0.29
SHMT1-203ENST00000354098 NOTCH3Q9UM47 2321 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 SMCO3A2RU48 225 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 G3V4G9 280 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 RAP2BP61225 183 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 DLK1P80370 383 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 NHLH2Q02577 135 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 ASB13Q8WXK3 278 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 TMEM190Q8WZ59 177 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 C20orf24Q9BUV8 137 aa16.87■□□□□ 0.29
SHMT1-203ENST00000354098 PUS1Q9Y606 427 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHMT1-203ENST00000354098 ZFP92A6NM28 416 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 SAP30O75446 220 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 CSN3P07498 182 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 LYL1P12980 280 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 EWSR1Q01844 656 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHMT1-203ENST00000354098 AKR1C1Q04828 323 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 SLC38A11Q08AI6 406 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 TOMM20LQ6UXN7 152 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 ADAMTSL5Q6ZMM2 481 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 ZNF600Q6ZNG1 722 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 STX12Q86Y82 276 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 THAP6Q8TBB0 222 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 MCRIP2Q9BUT9 160 aaKnown RBP16.86■□□□□ 0.29
SHMT1-203ENST00000354098 PEMTQ9UBM1 199 aa16.86■□□□□ 0.29
SHMT1-203ENST00000354098 hCG_2014768A0A024R1R8 64 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 ZNF207O43670 478 aaKnown RBP16.85■□□□□ 0.29
SHMT1-203ENST00000354098 ZNF90Q03938 601 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 THAP8Q8NA92 274 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 OR2T35Q8NGX2 323 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 ELOVL1Q9BW60 279 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 TMEM213A2RRL7 107 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 C2orf70A6NJV1 201 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 A8MWP6 167 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 SCGB2A1O75556 95 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 YPEL3P61236 119 aaPredicted RBP16.85■□□□□ 0.29
SHMT1-203ENST00000354098 SLC25A31Q9H0C2 315 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 ZFAND3Q9H8U3 227 aa16.85■□□□□ 0.29
SHMT1-203ENST00000354098 C9orf66Q5T8R8 295 aa16.84■□□□□ 0.29
SHMT1-203ENST00000354098 SAMD5Q5TGI4 173 aa16.84■□□□□ 0.29
SHMT1-203ENST00000354098 TMEM144Q7Z5S9 345 aa16.84■□□□□ 0.29
SHMT1-203ENST00000354098 GGACTQ9BVM4 153 aa16.84■□□□□ 0.29
SHMT1-203ENST00000354098 G3V3Q6 166 aa16.83■□□□□ 0.28
SHMT1-203ENST00000354098 S100A11P31949 105 aa16.83■□□□□ 0.28
SHMT1-203ENST00000354098 FGL1Q08830 312 aa16.83■□□□□ 0.28
SHMT1-203ENST00000354098 NPVFQ9HCQ7 196 aa16.83■□□□□ 0.28
SHMT1-203ENST00000354098 UFC1Q9Y3C8 167 aa16.83■□□□□ 0.28
SHMT1-203ENST00000354098 A0A1B0GVG6 124 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 FNDC10F2Z333 226 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 SMLR1H3BR10 107 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 RD3LP0DJH9 198 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 PSG1P11464 419 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 FOLR2P14207 255 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 RPL12P30050 165 aaKnown RBP16.82■□□□□ 0.28
SHMT1-203ENST00000354098 LILRB2Q8N423 598 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 Q8WTZ3 238 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 TRGV9Q99603 122 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 DAZ1Q9NQZ3 744 aaKnown RBP16.82■□□□□ 0.28
SHMT1-203ENST00000354098 SELENOKQ9Y6D0 94 aa16.82■□□□□ 0.28
SHMT1-203ENST00000354098 TOMM40O96008 361 aa16.81■□□□□ 0.28
SHMT1-203ENST00000354098 CBLN1P23435 193 aa16.81■□□□□ 0.28
SHMT1-203ENST00000354098 HBG1P69891 147 aa16.81■□□□□ 0.28
SHMT1-203ENST00000354098 HBG2P69892 147 aa16.81■□□□□ 0.28
SHMT1-203ENST00000354098 OR5C1Q8NGR4 320 aa16.81■□□□□ 0.28
SHMT1-203ENST00000354098 SCAF4O95104 1147 aaKnown RBP16.81■□□□□ 0.28
SHMT1-203ENST00000354098 OR2F1Q13607 317 aa16.81■□□□□ 0.28
SHMT1-203ENST00000354098 TMEM182Q6ZP80 229 aaPredicted RBP16.81■□□□□ 0.28
SHMT1-203ENST00000354098 K7EMT4 169 aa16.8■□□□□ 0.28
SHMT1-203ENST00000354098 GATA2P23769 480 aaPredicted RBP16.8■□□□□ 0.28
SHMT1-203ENST00000354098 ELLP55199 621 aaPredicted RBP16.8■□□□□ 0.28
SHMT1-203ENST00000354098 BAXQ07812 192 aa16.8■□□□□ 0.28
SHMT1-203ENST00000354098 VWC2Q2TAL6 325 aa16.8■□□□□ 0.28
SHMT1-203ENST00000354098 UQCC1Q9NVA1 299 aa16.8■□□□□ 0.28
SHMT1-203ENST00000354098 SIGLEC8Q9NYZ4 499 aa16.8■□□□□ 0.28
SHMT1-203ENST00000354098 IGHV3-49A0A0A0MS15 119 aa16.79■□□□□ 0.28
SHMT1-203ENST00000354098 WIPF1O43516 503 aa16.79■□□□□ 0.28
SHMT1-203ENST00000354098 INSL3P51460 131 aa16.79■□□□□ 0.28
SHMT1-203ENST00000354098 TEPPQ6URK8 271 aa16.79■□□□□ 0.28
SHMT1-203ENST00000354098 LSM4Q9Y4Z0 139 aaKnown RBP16.79■□□□□ 0.28
SHMT1-203ENST00000354098 HSPB11Q9Y547 144 aa16.79■□□□□ 0.28
SHMT1-203ENST00000354098 NBEAL1Q6ZS30 2694 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms