RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CNOT1A5YKK6 2376 aaKnown RBP12.15□□□□□ -0.46
TRAF3-202ENST00000351691 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 PSMB11A5LHX3 300 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 UBE2L3P68036 154 aaKnown RBP12.14□□□□□ -0.47
TRAF3-202ENST00000351691 PSG3Q16557 428 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 COL25A1Q9BXS0 654 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-202ENST00000351691 RIF1Q5UIP0 2472 aaKnown RBP12.14□□□□□ -0.47
TRAF3-202ENST00000351691 LOC102724200A0A096LPH7 203 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-202ENST00000351691 A8MWL6 223 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 LGALS7P47929 136 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 C2orf83Q53S99 150 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 C1orf185Q5T7R7 199 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 ZNF841Q6ZN19 808 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-202ENST00000351691 RFESDQ8TAC1 157 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 TMEM186Q96B77 213 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 PRSS22Q9GZN4 317 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
TRAF3-202ENST00000351691 ZNF292O60281 2723 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 IGKV1OR2-108A0A075B7D4 117 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 WNT9BO14905 357 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 Q6ZT83 130 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 C1orf162Q8NEQ5 155 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-202ENST00000351691 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 RPP21Q9H633 154 aaKnown RBP12.13□□□□□ -0.47
TRAF3-202ENST00000351691 BMI1P35226 326 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 GUSBP1Q15486 140 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 LRRC29Q8WV35 223 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 IFI27L2Q9H2X8 130 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 GNG12Q9UBI6 72 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 KLF12Q9Y4X4 402 aa12.13□□□□□ -0.47
TRAF3-202ENST00000351691 F2RL2O00254 374 aa12.12□□□□□ -0.47
TRAF3-202ENST00000351691 SIVA1O15304 175 aa12.12□□□□□ -0.47
TRAF3-202ENST00000351691 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
TRAF3-202ENST00000351691 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-202ENST00000351691 MYCNOSP40205 109 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 RPL39P5Q59GN2 51 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 OR2K2Q8NGT1 345 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 CACNG8Q8WXS5 425 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 ADTRPQ96IZ2 230 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 ZFHX2Q9C0A1 2572 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-202ENST00000351691 PPIAL4DF5H284 164 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 FGF6P10767 208 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 DEFB124Q8NES8 71 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 JMJD8Q96S16 334 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 PAXXQ9BUH6 204 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 MLST8Q9BVC4 326 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 JKAMPQ9P055 326 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 SMPXQ9UHP9 88 aa12.11□□□□□ -0.47
TRAF3-202ENST00000351691 ASPMQ8IZT6 3477 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 APOA2P02652 100 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 FAM87AP0C7U9 286 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 HSD52Q0P140 79 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 RBPMS2Q6ZRY4 209 aaKnown RBP12.1□□□□□ -0.47
TRAF3-202ENST00000351691 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 VSTM2AQ8TAG5 236 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-202ENST00000351691 FAM234AQ9H0X4 552 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 C19orf71A6NCJ1 209 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
TRAF3-202ENST00000351691 HOXC12P31275 282 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-202ENST00000351691 LOXL3P58215 753 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 CD69Q07108 199 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 GPR82Q96P67 336 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 NPFFR1Q9GZQ6 430 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 OBP2BQ9NPH6 170 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
TRAF3-202ENST00000351691 IGKV3-15P01624 115 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 MZT1Q08AG7 82 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 ZNF826PQ6ZT77 177 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 TPRX1Q8N7U7 411 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 A0A0G2JLM5 398 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 HAX1O00165 279 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 LYZL6O75951 148 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 MPV17P39210 176 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 IGFL2Q6UWQ7 119 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 WFDC8Q8IUA0 241 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 EPDR1Q9UM22 224 aa12.09□□□□□ -0.47
TRAF3-202ENST00000351691 DNAJC13O75165 2243 aa12.08□□□□□ -0.48
TRAF3-202ENST00000351691 TRAV5A0A0B4J249 113 aa12.08□□□□□ -0.48
TRAF3-202ENST00000351691 SPAARA0A1B0GVQ0 90 aa12.08□□□□□ -0.48
TRAF3-202ENST00000351691 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
TRAF3-202ENST00000351691 UPK2O00526 184 aa12.08□□□□□ -0.48
TRAF3-202ENST00000351691 LTC4SQ16873 150 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms