RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TRAV14DV4A0A0A6YYC5 116 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 CHEK1O14757 476 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 TSPAN4O14817 238 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 SCGB2A1O75556 95 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 SCAF4O95104 1147 aaKnown RBP16.56■□□□□ 0.24
SNX3-202ENST00000349379 IFNA4P05014 189 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 GPX4P36969 197 aaPredicted RBP16.56■□□□□ 0.24
SNX3-202ENST00000349379 SEC22CQ9BRL7 303 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 RHPN1-AS1Q9BWJ2 59 aa16.56■□□□□ 0.24
SNX3-202ENST00000349379 WRBO00258 174 aa16.55■□□□□ 0.24
SNX3-202ENST00000349379 OR10J1P30954 320 aa16.55■□□□□ 0.24
SNX3-202ENST00000349379 NKX2-1P43699 371 aaPredicted RBP16.55■□□□□ 0.24
SNX3-202ENST00000349379 YPEL3P61236 119 aaPredicted RBP16.55■□□□□ 0.24
SNX3-202ENST00000349379 RBPMS2Q6ZRY4 209 aaKnown RBP16.55■□□□□ 0.24
SNX3-202ENST00000349379 SBSPONQ8IVN8 264 aa16.55■□□□□ 0.24
SNX3-202ENST00000349379 NPIPB3Q92617 1050 aa16.55■□□□□ 0.24
SNX3-202ENST00000349379 SPAG8Q99932 426 aaPredicted RBP16.55■□□□□ 0.24
SNX3-202ENST00000349379 VSIRQ9H7M9 311 aa16.55■□□□□ 0.24
SNX3-202ENST00000349379 PRSS46E5RG02 174 aa16.54■□□□□ 0.24
SNX3-202ENST00000349379 POLR2GP62487 172 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX3-202ENST00000349379 RAB11AP62491 216 aa16.54■□□□□ 0.24
SNX3-202ENST00000349379 IAH1Q2TAA2 248 aaPredicted RBP16.54■□□□□ 0.24
SNX3-202ENST00000349379 FAM90A2PQ658T7 463 aa16.54■□□□□ 0.24
SNX3-202ENST00000349379 LAMTOR1Q6IAA8 161 aa16.54■□□□□ 0.24
SNX3-202ENST00000349379 RNF2Q99496 336 aa16.54■□□□□ 0.24
SNX3-202ENST00000349379 ASCL2Q99929 193 aa16.54■□□□□ 0.24
SNX3-202ENST00000349379 IGHV3-49A0A0A0MS15 119 aa16.53■□□□□ 0.24
SNX3-202ENST00000349379 IL5P05113 134 aa16.53■□□□□ 0.24
SNX3-202ENST00000349379 ZBTB8BQ8NAP8 495 aaPredicted RBP16.53■□□□□ 0.24
SNX3-202ENST00000349379 ENKURQ8TC29 256 aa16.53■□□□□ 0.24
SNX3-202ENST00000349379 ACY3Q96HD9 319 aa16.53■□□□□ 0.24
SNX3-202ENST00000349379 HUWE1Q7Z6Z7 4374 aaKnown RBP16.53■□□□□ 0.24
SNX3-202ENST00000349379 APOHP02749 345 aaPredicted RBP16.52■□□□□ 0.24
SNX3-202ENST00000349379 RPP30P78346 268 aaKnown RBP16.52■□□□□ 0.24
SNX3-202ENST00000349379 GAMTQ14353 236 aa16.52■□□□□ 0.24
SNX3-202ENST00000349379 LINC00322Q6ZN03 302 aaPredicted RBP16.52■□□□□ 0.24
SNX3-202ENST00000349379 C12orf45Q8N5I9 185 aaPredicted RBP16.52■□□□□ 0.24
SNX3-202ENST00000349379 WFDC10AQ9H1F0 79 aa16.52■□□□□ 0.24
SNX3-202ENST00000349379 IGKV1D-37A0A075B6S9 117 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 OR11H12B2RN74 326 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 TOMM40O96008 361 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 CRYBB3P26998 211 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 PAX9P55771 341 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 NRARPQ7Z6K4 114 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 ST8SIA2Q92186 375 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 SLC35E1Q96K37 410 aa16.51■□□□□ 0.23
SNX3-202ENST00000349379 IGHV3OR16-13A0A075B7E8 117 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 IGHV3-74A0A0B4J1X5 117 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 H3BP45 60 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 CCSO14618 274 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 BMI1P35226 326 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 SPANXN5Q5MJ07 72 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 LILRB2Q8N423 598 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 DEFB125Q8N687 156 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 Q8WTZ3 238 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 SMIM8Q96KF7 97 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 METTL26Q96S19 204 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 RCL1Q9Y2P8 373 aaKnown RBP16.5■□□□□ 0.23
SNX3-202ENST00000349379 STRAPQ9Y3F4 350 aaKnown RBP16.5■□□□□ 0.23
SNX3-202ENST00000349379 U3KQE9 123 aa16.5■□□□□ 0.23
SNX3-202ENST00000349379 PMS2P5A8MQ11 134 aa16.49■□□□□ 0.23
SNX3-202ENST00000349379 SSSCA1O60232 199 aa16.49■□□□□ 0.23
SNX3-202ENST00000349379 NPPCP23582 126 aa16.49■□□□□ 0.23
SNX3-202ENST00000349379 TM2D3Q9BRN9 247 aa16.49■□□□□ 0.23
SNX3-202ENST00000349379 TUBA4BQ9H853 241 aa16.49■□□□□ 0.23
SNX3-202ENST00000349379 CD5P06127 495 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 THAP8Q8NA92 274 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 RAB40CQ96S21 281 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 FAM110AQ9BQ89 295 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 PSENENQ9NZ42 101 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 GSKIPQ9P0R6 139 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 PAIP2BQ9ULR5 123 aaKnown RBP16.48■□□□□ 0.23
SNX3-202ENST00000349379 U3KQK5 164 aa16.48■□□□□ 0.23
SNX3-202ENST00000349379 IGKV1OR2-108A0A075B7D4 117 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 A0A1W2PS18 150 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 OR4C46A6NHA9 309 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 MBPP02686 304 aaPredicted RBP16.47■□□□□ 0.23
SNX3-202ENST00000349379 RD3LP0DJH9 198 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 PSG1P11464 419 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 TAS2R30P59541 319 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 USF2Q15853 346 aaPredicted RBP16.47■□□□□ 0.23
SNX3-202ENST00000349379 TMEM14EPQ6UXP3 125 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 TCF24Q7RTU0 167 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 TRGV9Q99603 122 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 TMEM231Q9H6L2 316 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 SRD5A3Q9H8P0 318 aa16.47■□□□□ 0.23
SNX3-202ENST00000349379 RBMY1BA6NDE4 496 aaKnown RBP16.46■□□□□ 0.23
SNX3-202ENST00000349379 RBMY1EA6NEQ0 496 aaKnown RBP16.46■□□□□ 0.23
SNX3-202ENST00000349379 ZFP92A6NM28 416 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 SCGB1D2O95969 90 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 IL4P05112 153 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 RBMY1DP0C7P1 496 aaKnown RBP16.46■□□□□ 0.23
SNX3-202ENST00000349379 DEFA1P59665 94 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 DEFA3P59666 94 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 HAGHQ16775 308 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 ODF3L2Q3SX64 289 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 C2orf50Q96LR7 162 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 MARVELD1Q9BSK0 173 aa16.46■□□□□ 0.23
SNX3-202ENST00000349379 IGHV3-66A0A0C4DH42 116 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 TSC22D2O75157 780 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms