RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ASPHD1Q5U4P2 390 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 ZNF329Q86UD4 541 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 VKORC1L1Q8N0U8 176 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 TPRX1Q8N7U7 411 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 PLPPR2Q96GM1 343 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 S1PR3Q99500 378 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
CHRNA1-202ENST00000348749 PIEZO1Q92508 2521 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 TRIOO75962 3097 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 IGKV1OR2-108A0A075B7D4 117 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 TRGV5A0A0B4J1U4 118 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 DEFB108AA8MXU0 73 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 IGKV3-15P01624 115 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 AZU1P20160 251 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 CFHR2P36980 270 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 UQCRFS1P47985 274 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 ALKBH6Q3KRA9 238 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 Q6ZT83 130 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 TEX45Q8NA69 505 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 OR9G4Q8NGQ1 327 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 ADTRPQ96IZ2 230 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 FER1L6-AS2Q96M78 137 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 SIGMAR1Q99720 223 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 RPP21Q9H633 154 aaKnown RBP8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 RABAC1Q9UI14 185 aa8.38□□□□□ -1.07
CHRNA1-202ENST00000348749 A8MWL6 223 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 MGST3O14880 152 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 WNT9BO14905 357 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 IGHV1-2P23083 117 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 MPV17P39210 176 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 POU2AF1Q16633 256 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 MBNL2Q5VZF2 373 aaKnown RBP8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 DDB2Q92466 427 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 ATP6V0BQ99437 205 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 PRSS22Q9GZN4 317 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 SPCS1Q9Y6A9 102 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 DNAJC13O75165 2243 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 PATE3B3GLJ2 98 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 PRDX2P32119 198 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 C3AR1Q16581 482 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 TMEM30BQ3MIR4 351 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 OR4X2Q8NGF9 303 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 ZNF714Q96N38 554 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 MCRIP2Q9BUT9 160 aaKnown RBP8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 ZNF747Q9BV97 191 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 ZNF492Q9P255 531 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 GNG12Q9UBI6 72 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 BDP1A6H8Y1 2624 aa8.37□□□□□ -1.07
CHRNA1-202ENST00000348749 TIMM8AO60220 97 aaPredicted RBP8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 GOSR1O95249 250 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 ADAMTSL5Q6ZMM2 481 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 LINC00696Q6ZRV3 163 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 RBPMS2Q6ZRY4 209 aaKnown RBP8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 ZNF826PQ6ZT77 177 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 ZNF257Q9Y2Q1 563 aa8.36□□□□□ -1.07
CHRNA1-202ENST00000348749 SRRM4A7MD48 611 aaKnown RBP8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 LAMTOR5O43504 91 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 SNAI2O43623 268 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 CD24P25063 80 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 MYCNOSP40205 109 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 GUSBP1Q15486 140 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 C2orf83Q53S99 150 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 FA2HQ7L5A8 372 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 GCSAMQ8N6F7 178 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 FAM169BQ8N8A8 192 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 TMEM178AQ8NBL3 297 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 NEU4Q8WWR8 484 aaPredicted RBP8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 MLST8Q9BVC4 326 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 FAM234AQ9H0X4 552 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 PRNDQ9UKY0 176 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 KLF12Q9Y4X4 402 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 TEX48A0A1B0GUV7 120 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 A1L4Q6 167 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 C19orf71A6NCJ1 209 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 SRRM5B3KS81 715 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 H0Y8G0 127 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 FTH1P19P0C7X4 201 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 FABP2P12104 132 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 LOXL3P58215 753 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 RPL39P5Q59GN2 51 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 MORN5Q5VZ52 161 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 BHLHA15Q7RTS1 189 aaPredicted RBP8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 MOB3BQ86TA1 216 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 CD177Q8N6Q3 437 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 PAXXQ9BUH6 204 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 IFI27L2Q9H2X8 130 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 PLSCR4Q9NRQ2 329 aa8.35□□□□□ -1.07
CHRNA1-202ENST00000348749 CACNA1DQ01668 2161 aa8.34□□□□□ -1.07
CHRNA1-202ENST00000348749 DOCK7Q96N67 2140 aa8.34□□□□□ -1.07
CHRNA1-202ENST00000348749 TRAV5A0A0B4J249 113 aa8.34□□□□□ -1.07
CHRNA1-202ENST00000348749 PRR33A8MZF0 331 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms