RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NDUFA3O95167 84 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
UBE3B-202ENST00000342494 CD55P08174 381 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 FAM90A9PA6NNJ1 464 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 M0R1W7 72 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 SMIM13P0DJ93 91 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 PPIFP30405 207 aaKnown RBP12.39□□□□□ -0.43
UBE3B-202ENST00000342494 TEX38Q6PEX7 206 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 PRADC1Q9BSG0 188 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 BPESC1Q9GZL8 116 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 ABCA4P78363 2273 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 ANKRD36A6QL64 1941 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 LINC00469Q8N7U9 141 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 NEUROG1Q92886 237 aa12.39□□□□□ -0.43
UBE3B-202ENST00000342494 SLC25A20O43772 301 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 CD5P06127 495 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 SRP19P09132 144 aaKnown RBP12.38□□□□□ -0.43
UBE3B-202ENST00000342494 COTL1Q14019 142 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 FAM89BQ8N5H3 189 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 NABP1Q96AH0 204 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 KIR3DL3Q8N743 410 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 C1QTNF9BB2RNN3 333 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
UBE3B-202ENST00000342494 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 ZNF98A6NK75 572 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 LCNL1Q6ZST4 164 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-202ENST00000342494 SEPSECSQ9HD40 501 aaKnown RBP12.38□□□□□ -0.43
UBE3B-202ENST00000342494 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 K7ENP7 123 aa12.38□□□□□ -0.43
UBE3B-202ENST00000342494 ZNF362Q5T0B9 420 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-202ENST00000342494 IGKV1-12A0A0C4DH73 117 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 IGKV1D-12P01611 117 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 MST1P26927 711 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 CCL20P78556 96 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 PATJQ8NI35 1801 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 A0A087WV48 116 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 ADARB2-AS1A8MUL3 147 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 RNASE7Q9H1E1 156 aaKnown RBP12.37□□□□□ -0.43
UBE3B-202ENST00000342494 RNF5Q99942 180 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 PRR32B1ATL7 298 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 GHRHP01286 108 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 BMPERQ8N8U9 685 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
UBE3B-202ENST00000342494 A0A1W2PRE2 83 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 LY6HO94772 140 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 ZNF329Q86UD4 541 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 CD177Q8N6Q3 437 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 CD28P10747 220 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 EFNB1P98172 346 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 CYSLTR1Q9Y271 337 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 TBL2Q9Y4P3 447 aaKnown RBP12.36□□□□□ -0.43
UBE3B-202ENST00000342494 IGHG3P01860 377 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 RPL15P61313 204 aaKnown RBP12.36□□□□□ -0.43
UBE3B-202ENST00000342494 POLEQ07864 2286 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 ARHGEF17Q96PE2 2063 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-202ENST00000342494 PSPNO60542 156 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-202ENST00000342494 RCHY1Q96PM5 261 aa12.36□□□□□ -0.43
UBE3B-202ENST00000342494 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
UBE3B-202ENST00000342494 COL8A2P25067 703 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 C5orf64Q2M2E5 130 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 LOC285556D6RIA3 1793 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 PSME4Q14997 1843 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 TRAV9-1A0A075B6T8 112 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 SNAI2O43623 268 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBE3B-202ENST00000342494 EFNB3Q15768 340 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 Q5PR19 223 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 ERVH48-1M5A8F1 160 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 APOMO95445 188 aa12.35□□□□□ -0.43
UBE3B-202ENST00000342494 J3QKU1 62 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 NDUFS8O00217 210 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 PSCAO43653 123 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 CACNA1DQ01668 2161 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 ZNF474Q6S9Z5 364 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-202ENST00000342494 ASCL4Q6XD76 172 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 SLC25A48Q6ZT89 311 aaKnown RBP12.34□□□□□ -0.43
UBE3B-202ENST00000342494 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 TSPAN13O95857 204 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 ACTL10Q5JWF8 245 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 TRGV1A0A0A0MS02 117 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 A0A0A6YYD4 124 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 PRR30Q53SZ7 412 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-202ENST00000342494 A0A1B0GWJ7 208 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 USMG5Q96IX5 58 aa12.34□□□□□ -0.43
UBE3B-202ENST00000342494 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 BUB1B-PAK6H3BSN5 160 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 PSG1P11464 419 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 GAFA1Q96PS6 74 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms