RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ATP5IP56385 69 aaPredicted RBP11.5□□□□□ -0.57
VAPA-201ENST00000340541 TIGITQ495A1 244 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 RBPMS2Q6ZRY4 209 aaKnown RBP11.5□□□□□ -0.57
VAPA-201ENST00000340541 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 OR52B4Q8NGK2 314 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 COQ8AQ8NI60 647 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 MITD1Q8WV92 249 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 RNF2Q99496 336 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 SPAG8Q99932 426 aaPredicted RBP11.5□□□□□ -0.57
VAPA-201ENST00000340541 MAGT1Q9H0U3 335 aa11.5□□□□□ -0.57
VAPA-201ENST00000340541 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 OR11H12B2RN74 326 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 SYNGR2O43760 224 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
VAPA-201ENST00000340541 IAPPP10997 89 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 ASAH1Q13510 395 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 FAM90A2PQ658T7 463 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 SLC16A13Q7RTY0 426 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 VSIRQ9H7M9 311 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 BATF3Q9NR55 127 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 NUDT15Q9NV35 164 aa11.49□□□□□ -0.57
VAPA-201ENST00000340541 TRAV6A0A075B6T7 132 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 MED6O75586 246 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 OR10J1P30954 320 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 YPEL3P61236 119 aaPredicted RBP11.48□□□□□ -0.57
VAPA-201ENST00000340541 IFITM3Q01628 133 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 ID3Q02535 119 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 HAGHQ16775 308 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 LAMTOR1Q6IAA8 161 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 LILRB2Q8N423 598 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 OR4D5Q8NGN0 318 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 OR1S2Q8NGQ3 325 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 ST8SIA2Q92186 375 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 WDR12Q9GZL7 423 aaKnown RBP11.48□□□□□ -0.57
VAPA-201ENST00000340541 TUBA4BQ9H853 241 aa11.48□□□□□ -0.57
VAPA-201ENST00000340541 DNAH7Q8WXX0 4024 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 LCE6AA0A183 80 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
VAPA-201ENST00000340541 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
VAPA-201ENST00000340541 UPK1BO75841 260 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 IFNA4P05014 189 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
VAPA-201ENST00000340541 ZNF846Q147U1 533 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 ACY3Q96HD9 319 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 SRD5A3Q9H8P0 318 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
VAPA-201ENST00000340541 PRSS46E5RG02 174 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 WRBO00258 174 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 SCGB2A1O75556 95 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 IFNA21P01568 189 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 CRYBB3P26998 211 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 GPX4P36969 197 aaPredicted RBP11.46□□□□□ -0.57
VAPA-201ENST00000340541 GAMTQ14353 236 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 ODF3L2Q3SX64 289 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 CIB3Q96Q77 187 aaPredicted RBP11.46□□□□□ -0.57
VAPA-201ENST00000340541 SPATA25Q9BR10 227 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 SEC22CQ9BRL7 303 aa11.46□□□□□ -0.57
VAPA-201ENST00000340541 IGKV1D-37A0A075B6S9 117 aa11.45□□□□□ -0.58
VAPA-201ENST00000340541 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
VAPA-201ENST00000340541 FAM240BA0A1B0GVZ2 78 aa11.45□□□□□ -0.58
VAPA-201ENST00000340541 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
VAPA-201ENST00000340541 POLR2GP62487 172 aaKnown RBP eCLIP11.45□□□□□ -0.58
VAPA-201ENST00000340541 U3KQE9 123 aa11.45□□□□□ -0.58
VAPA-201ENST00000340541 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 DFFBO76075 338 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 TOMM40O96008 361 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 NPPCP23582 126 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
VAPA-201ENST00000340541 RAB11AP62491 216 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 USF2Q15853 346 aaPredicted RBP11.44□□□□□ -0.58
VAPA-201ENST00000340541 IAH1Q2TAA2 248 aaPredicted RBP11.44□□□□□ -0.58
VAPA-201ENST00000340541 MZT2BQ6NZ67 158 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 TCF24Q7RTU0 167 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 ZBTB8BQ8NAP8 495 aaPredicted RBP11.44□□□□□ -0.58
VAPA-201ENST00000340541 ZNF431Q8TF32 576 aaPredicted RBP11.44□□□□□ -0.58
VAPA-201ENST00000340541 Q8WTZ3 238 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 METTL26Q96S19 204 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 UBQLN2Q9UHD9 624 aa11.44□□□□□ -0.58
VAPA-201ENST00000340541 H3BP45 60 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 CCSO14618 274 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 PSG1P11464 419 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 PAX9P55771 341 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 SPANXN5Q5MJ07 72 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
VAPA-201ENST00000340541 PAIP2BQ9ULR5 123 aaKnown RBP11.43□□□□□ -0.58
VAPA-201ENST00000340541 IGKV3-7A0A075B6H7 116 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 IGKV1OR2-108A0A075B7D4 117 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 SSSCA1O60232 199 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 IL4P05112 153 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 CD5P06127 495 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 RD3LP0DJH9 198 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 BMI1P35226 326 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms