RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 OR1L6Q8NGR2 347 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 OR4A5Q8NH83 315 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 C19orf24Q9BVV8 132 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 CBLN4Q9NTU7 201 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 MALRD1Q5VYJ5 2156 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 MGST1P10620 155 aaKnown RBP13.1□□□□□ -0.31
LITAF-201ENST00000339430 IER3P46695 156 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 YPEL3P61236 119 aaPredicted RBP13.1□□□□□ -0.31
LITAF-201ENST00000339430 VMA21Q3ZAQ7 101 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 PNKDQ8N490 385 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 LINC00479Q96M42 142 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 TMEM133Q9H2Q1 129 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 ZNF355PQ9NSJ1 428 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 KAAG1Q9UBP8 84 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 LY96Q9Y6Y9 160 aa13.1□□□□□ -0.31
LITAF-201ENST00000339430 SLC35B1P78383 322 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 MRPL18Q9H0U6 180 aaKnown RBP13.09□□□□□ -0.31
LITAF-201ENST00000339430 IGKV1D-37A0A075B6S9 117 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 IGHV3-21A0A0B4J1V1 117 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 SUB1P53999 127 aaKnown RBP eCLIP13.09□□□□□ -0.31
LITAF-201ENST00000339430 TCL1AP56279 114 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 MRGPRG-AS1Q2M3A8 158 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 TIGITQ495A1 244 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 PATE2Q6UY27 113 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 C8orf31Q8N9H6 132 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 MISP3Q96FF7 219 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 MRPL32Q9BYC8 188 aaKnown RBP13.09□□□□□ -0.31
LITAF-201ENST00000339430 UBTD1Q9HAC8 227 aa13.09□□□□□ -0.31
LITAF-201ENST00000339430 INS-IGF2F8WCM5 200 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 MOSP00540 346 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 DDTP30046 118 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 PPOXP50336 477 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 ZNF137PP52743 207 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 C14orf144Q96I85 54 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 A0A087X0M5 115 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 A0A1B0GX30 115 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 A0A1W2PRE2 83 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 TCRBV4S1A1TA0A5B7 111 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 FCN1O00602 326 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 GCGP01275 180 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 MC5RP33032 325 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 TNXAQ16473 311 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 ZNF664Q8N3J9 261 aa13.08□□□□□ -0.32
LITAF-201ENST00000339430 CSMD1Q96PZ7 3565 aa13.07□□□□□ -0.32
LITAF-201ENST00000339430 IGLV2-8P01709 118 aa13.07□□□□□ -0.32
LITAF-201ENST00000339430 IGHV2-26A0A0B4J1V2 119 aa13.07□□□□□ -0.32
LITAF-201ENST00000339430 PAXXQ9BUH6 204 aa13.07□□□□□ -0.32
LITAF-201ENST00000339430 SERTAD4Q9NUC0 356 aa13.07□□□□□ -0.32
LITAF-201ENST00000339430 TP53TG3Q9ULZ0 132 aa13.07□□□□□ -0.32
LITAF-201ENST00000339430 IGLC7A0M8Q6 106 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 ORM2P19652 201 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 COX7A1P24310 79 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 MFAP2P55001 183 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 DTX2Q86UW9 622 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 IGF2BP2-AS1Q96M15 143 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 C22orf46C9J442 243 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 GATCO43716 136 aaKnown RBP13.06□□□□□ -0.32
LITAF-201ENST00000339430 LY6HO94772 140 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 IBA57Q5T440 356 aaKnown RBP13.06□□□□□ -0.32
LITAF-201ENST00000339430 LINC00305Q7Z4B0 112 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 OR1L4Q8NGR5 311 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 RNF2Q99496 336 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 RAB1BQ9H0U4 201 aa13.06□□□□□ -0.32
LITAF-201ENST00000339430 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 TRAV34A0A0B4J273 112 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 F2Z2F3 143 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 CA1P00915 261 aaPredicted RBP13.05□□□□□ -0.32
LITAF-201ENST00000339430 CRISP2P16562 243 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 BPIFB3P59826 476 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 CMTM2Q8TAZ6 248 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 ARHGAP32A7KAX9 2087 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 ABCA1O95477 2261 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 A1L4Q6 167 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 CD33P20138 364 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 RPL27AP46776 148 aaKnown RBP13.05□□□□□ -0.32
LITAF-201ENST00000339430 LGALS7P47929 136 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 THAP8Q8NA92 274 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 OR1B1Q8NGR6 318 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 SPOCK3Q9BQ16 436 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 TNFRSF19Q9NS68 423 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 AMMECR1Q9Y4X0 333 aaPredicted RBP13.05□□□□□ -0.32
LITAF-201ENST00000339430 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
LITAF-201ENST00000339430 AKAP6Q13023 2319 aa13.04□□□□□ -0.32
LITAF-201ENST00000339430 BLNKQ8WV28 456 aa13.04□□□□□ -0.32
LITAF-201ENST00000339430 GSX1Q9H4S2 264 aaPredicted RBP13.04□□□□□ -0.32
LITAF-201ENST00000339430 OSTCQ9NRP0 149 aa13.04□□□□□ -0.32
LITAF-201ENST00000339430 CDKN1AP38936 164 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 LINC00310P59036 64 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 SELENOTP62341 195 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 SSX2Q16385 188 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 MRPL54Q6P161 138 aaKnown RBP13.03□□□□□ -0.32
LITAF-201ENST00000339430 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 IGHV1-3A0A0C4DH29 117 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms