RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
PTPN21-201ENST00000328736 MINOS1-NBL1R4GNA1 71 aa12.8□□□□□ -0.36
PTPN21-201ENST00000328736 TOMM40O96008 361 aa12.8□□□□□ -0.36
PTPN21-201ENST00000328736 IGHV1-46P01743 117 aa12.8□□□□□ -0.36
PTPN21-201ENST00000328736 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
PTPN21-201ENST00000328736 SPRR3Q9UBC9 169 aa12.8□□□□□ -0.36
PTPN21-201ENST00000328736 DERL1Q9BUN8 251 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 NHP2Q9NX24 153 aaKnown RBP12.79□□□□□ -0.36
PTPN21-201ENST00000328736 CLDN16Q9Y5I7 305 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 IGLV3-32A0A0A0MS00 114 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 H3BUT2 72 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 MBNL3Q9NUK0 354 aaKnown RBP12.79□□□□□ -0.36
PTPN21-201ENST00000328736 TMEM170AQ8WVE7 144 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 PYYP10082 97 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 SRD5A1P18405 259 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 EVI2AP22794 236 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
PTPN21-201ENST00000328736 SPSB3Q6PJ21 355 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 ATP5L2Q7Z4Y8 100 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
PTPN21-201ENST00000328736 SMPXQ9UHP9 88 aa12.79□□□□□ -0.36
PTPN21-201ENST00000328736 UNC13CQ8NB66 2214 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 LYNX1G3V0Z9 82 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 LYNX1P0DP58 116 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 CCL1P22362 96 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 TIMP3P35625 211 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 MS4A6AQ9H2W1 248 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 LAGE3Q14657 143 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 TMEM238C9JI98 176 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 SERF1AO75920 110 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
PTPN21-201ENST00000328736 ST6GALNAC3Q8NDV1 305 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 DUTP33316 252 aaKnown RBP12.78□□□□□ -0.36
PTPN21-201ENST00000328736 ARID1AO14497 2285 aa12.78□□□□□ -0.36
PTPN21-201ENST00000328736 B4DSR2 109 aa12.77□□□□□ -0.36
PTPN21-201ENST00000328736 RAMP3O60896 148 aa12.77□□□□□ -0.36
PTPN21-201ENST00000328736 GNB1LQ9BYB4 327 aa12.77□□□□□ -0.36
PTPN21-201ENST00000328736 TMEM8BA6NDV4 472 aa12.77□□□□□ -0.37
PTPN21-201ENST00000328736 RASL10AQ92737 203 aa12.77□□□□□ -0.37
PTPN21-201ENST00000328736 RNF5Q99942 180 aa12.77□□□□□ -0.37
PTPN21-201ENST00000328736 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.37
PTPN21-201ENST00000328736 TRBV7-1A0A0A6YYK4 115 aa12.77□□□□□ -0.37
PTPN21-201ENST00000328736 TSKUQ8WUA8 353 aa12.77□□□□□ -0.37
PTPN21-201ENST00000328736 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
PTPN21-201ENST00000328736 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
PTPN21-201ENST00000328736 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.76□□□□□ -0.37
PTPN21-201ENST00000328736 IGKV1D-13A0A0B4J2D9 117 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 IGKV1-13P0DP09 117 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN21-201ENST00000328736 LYZL4Q96KX0 146 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 BRWD1Q9NSI6 2320 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 WFDC12Q8WWY7 111 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 PLEKHB2Q96CS7 222 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 EFNB3Q15768 340 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 NR2C2APQ86WQ0 139 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 FBLN5Q9UBX5 448 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 RALGAPA2Q2PPJ7 1873 aa12.76□□□□□ -0.37
PTPN21-201ENST00000328736 GATD1Q8NB37 220 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 LCTP09848 1927 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 SEC11AP67812 179 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 ZFP36L1Q07352 338 aaKnown RBP12.75□□□□□ -0.37
PTPN21-201ENST00000328736 TRAV9-2A0A087WT02 112 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 A8MWV9 139 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 LGALS1P09382 135 aaKnown RBP12.75□□□□□ -0.37
PTPN21-201ENST00000328736 OVOL2Q9BRP0 275 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 C1QTNF9P0C862 333 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 RNF114Q9Y508 228 aa12.75□□□□□ -0.37
PTPN21-201ENST00000328736 TRGV1A0A0A0MS02 117 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 PCP4P48539 62 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 DMRTA1Q5VZB9 504 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 TEX43Q6ZNM6 134 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 ZCCHC24Q8N2G6 241 aaKnown RBP12.74□□□□□ -0.37
PTPN21-201ENST00000328736 IFI27L1Q96BM0 104 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 DEPPQ9NTK1 212 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 RNF222A6NCQ9 220 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 M0R1W7 72 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 PAX4O43316 350 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 RPL35AP18077 110 aaKnown RBP12.74□□□□□ -0.37
PTPN21-201ENST00000328736 C9orf139Q6ZV77 190 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 USMG5Q96IX5 58 aa12.74□□□□□ -0.37
PTPN21-201ENST00000328736 PINLYPA6NC86 204 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 INSP01308 110 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 IGHV1-8P0DP01 117 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 PLSCR4Q9NRQ2 329 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 CD300EQ496F6 205 aaPredicted RBP12.73□□□□□ -0.37
PTPN21-201ENST00000328736 LAMTOR3Q9UHA4 124 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 NEUROG3Q9Y4Z2 214 aa12.73□□□□□ -0.37
PTPN21-201ENST00000328736 DICER1Q9UPY3 1922 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms