RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
COL4A5-201ENST00000328300 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 ZNF56Q15929 161 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 HIST1H4GQ99525 98 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 SUPT4H1P63272 117 aaKnown RBP9.37□□□□□ -0.91
COL4A5-201ENST00000328300 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
COL4A5-201ENST00000328300 SLX1AQ9BQ83 275 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 CTAG1AP78358 180 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 TCF15Q12870 199 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 ARHGEF17Q96PE2 2063 aaPredicted RBP9.37□□□□□ -0.91
COL4A5-201ENST00000328300 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 C8orf31Q8N9H6 132 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 CGB1A6NKQ9 187 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 STAG3L3P0CL85 134 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 TMEM136Q6ZRR5 245 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 H0YIZ8 118 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 H7C2G1 150 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 ATP5LO75964 103 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 C9orf139Q6ZV77 190 aa9.37□□□□□ -0.91
COL4A5-201ENST00000328300 PPBPP02775 128 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 SNRPCP09234 159 aaKnown RBP9.36□□□□□ -0.91
COL4A5-201ENST00000328300 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 TTC32Q5I0X7 151 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 RALGAPA1Q6GYQ0 2036 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 ERVK11-1P61568 191 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 ATOH7Q8N100 152 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 FER1L6-AS1Q8NA97 138 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 RP1L1Q8IWN7 2480 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-201ENST00000328300 IGLV3-1P01715 115 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 SCGB1A1P11684 91 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 SP5Q6BEB4 398 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-201ENST00000328300 KAAG1Q9UBP8 84 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 BRWD1Q9NSI6 2320 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 FAM181BA6NEQ2 426 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-201ENST00000328300 LDLRAD2Q5SZI1 272 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 DKK1O94907 266 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 MIEN1Q9BRT3 115 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 ALKBH7Q9BT30 221 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-201ENST00000328300 PRO3102Q9H379 93 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
COL4A5-201ENST00000328300 PEF1Q9UBV8 284 aaKnown RBP9.36□□□□□ -0.91
COL4A5-201ENST00000328300 TRBV20OR9-2A0A075B6H5 130 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 IGKV1-5P01602 117 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 CIRBPQ14011 172 aaKnown RBP9.35□□□□□ -0.91
COL4A5-201ENST00000328300 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 TMEM101Q96IK0 257 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 DUX3Q96PT4 197 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 MRPS16Q9Y3D3 137 aaKnown RBP9.35□□□□□ -0.91
COL4A5-201ENST00000328300 TNFRSF18Q9Y5U5 241 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 FAM215AQ9Y5M1 114 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 F2Z2F3 143 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 IGHV3-23P01764 117 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 MSMBP08118 114 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 COL8A2P25067 703 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 TEX38Q6PEX7 206 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 SIGLEC15Q6ZMC9 328 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 C9JCJ5 164 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 C1orf122Q6ZSJ8 110 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 GGTLC1Q9BX51 225 aa9.35□□□□□ -0.91
COL4A5-201ENST00000328300 BEX4Q9NWD9 120 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-201ENST00000328300 LINC00469Q8N7U9 141 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 IGHV3-48P01763 117 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 IGHV3OR16-12A0A075B7B8 117 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 LINC00587B1AMM8 73 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 ATP5G3P48201 142 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 HEATR5BQ9P2D3 2071 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 C5orf63A6NC05 138 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 H3BTX0 84 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 TOMM40O96008 361 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 SCN8AQ9UQD0 1980 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 A0A1B0GV72 72 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 J3QKU1 62 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 STHQ8IWL8 128 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 ITLN2Q8WWU7 325 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-201ENST00000328300 PSG8Q9UQ74 426 aa9.34□□□□□ -0.91
COL4A5-201ENST00000328300 MYLKQ15746 1914 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV2-70DA0A0C4DH43 119 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 ZNF833PQ6ZTB9 187 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 FAM110DQ8TAY7 271 aaPredicted RBP9.33□□□□□ -0.92
COL4A5-201ENST00000328300 SPTBP11277 2137 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
COL4A5-201ENST00000328300 RNF114Q9Y508 228 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 SELLP14151 372 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 HOXA5P20719 270 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 SCN2AQ99250 2005 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 SMIM13P0DJ93 91 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 LGALS3P17931 250 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms