RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 TTTY12Q9BZ98 90 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 SRRM4A7MD48 611 aaKnown RBP10.34□□□□□ -0.75
CCDC60-201ENST00000327554 A8MWL6 223 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 FSTL3O95633 263 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 SSBP2P81877 361 aaPredicted RBP10.34□□□□□ -0.75
CCDC60-201ENST00000327554 CT83Q5H943 113 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 CT45A1Q5HYN5 189 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 CT45A3Q8NHU0 189 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 KLF12Q9Y4X4 402 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 IGKV1D-17A0A075B6S4 117 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 TEX50A0A1B0GTY4 177 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 H3BUT2 72 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 UPK2O00526 184 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 NCR2O95944 276 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 TEX45Q8NA69 505 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 OR1N2Q8NGR9 330 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 NEU4Q8WWR8 484 aaPredicted RBP10.34□□□□□ -0.75
CCDC60-201ENST00000327554 NAA38Q9BRA0 125 aaKnown RBP10.34□□□□□ -0.75
CCDC60-201ENST00000327554 DYSFO75923 2080 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 CELSR3Q9NYQ7 3312 aa10.34□□□□□ -0.75
CCDC60-201ENST00000327554 OR1L8Q8NGR8 309 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 GPR82Q96P67 336 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 EPDR1Q9UM22 224 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 MOSP00540 346 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 FAM87AP0C7U9 286 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 ATP5IP56385 69 aaPredicted RBP10.33□□□□□ -0.76
CCDC60-201ENST00000327554 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 RBPMS2Q6ZRY4 209 aaKnown RBP10.33□□□□□ -0.76
CCDC60-201ENST00000327554 ITLN1Q8WWA0 313 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 ZNF747Q9BV97 191 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 TANC2Q9HCD6 1990 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 CEP290O15078 2479 aa10.33□□□□□ -0.76
CCDC60-201ENST00000327554 A6NDN8 102 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 C9orf172C9J069 976 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 MGST3O14880 152 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
CCDC60-201ENST00000327554 ZNF784Q8NCA9 323 aaPredicted RBP10.32□□□□□ -0.76
CCDC60-201ENST00000327554 OR10W1Q8NGF6 305 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 OR2K2Q8NGT1 345 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 OR10AG1Q8NH19 301 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 CALYQ9NYX4 217 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 A0A0G2JLM5 398 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 P01737 135 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
CCDC60-201ENST00000327554 CGB3P0DN86 165 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 CGB7P0DN87 165 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 KIR3DS1Q14943 382 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 TMEM177Q53S58 311 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 TNFRSF14Q92956 283 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 NPFFR1Q9GZQ6 430 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
CCDC60-201ENST00000327554 TIMM8BQ9Y5J9 83 aaPredicted RBP10.32□□□□□ -0.76
CCDC60-201ENST00000327554 OVOL3O00110 214 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 NTN3O00634 580 aaPredicted RBP10.31□□□□□ -0.76
CCDC60-201ENST00000327554 CHEK1O14757 476 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
CCDC60-201ENST00000327554 CSN3P07498 182 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 PPIAL4GP0DN37 164 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 SVIPQ8NHG7 77 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 DPF1Q92782 380 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 FZR1Q9UM11 496 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 HILPDAQ9Y5L2 63 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 PRR14LQ5THK1 2151 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 TIMM8AO60220 97 aaPredicted RBP10.31□□□□□ -0.76
CCDC60-201ENST00000327554 GOSR1O95249 250 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 GUSBP1Q15486 140 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 C17orf58Q2M2W7 97 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 BHLHA15Q7RTS1 189 aaPredicted RBP10.31□□□□□ -0.76
CCDC60-201ENST00000327554 UBALD2Q8IYN6 164 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 OR1L4Q8NGR5 311 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 CACNG8Q8WXS5 425 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 KNTC1P50748 2209 aa10.31□□□□□ -0.76
CCDC60-201ENST00000327554 LTAP01374 205 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 IGHV1-2P23083 117 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 SAMD13Q5VXD3 122 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 ZNRF1Q8ND25 227 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 ADTRPQ96IZ2 230 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 JKAMPQ9P055 326 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 IGKV1D-37A0A075B6S9 117 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
CCDC60-201ENST00000327554 PGPA6NDG6 321 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 DLL1O00548 723 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 KLK10O43240 276 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 PLAUP00749 431 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 IGKV1-16P04430 117 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 CEACAM3P40198 252 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 PDPNQ86YL7 162 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 BOD1L2Q8IYS8 172 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 OR4A5Q8NH83 315 aa10.3□□□□□ -0.76
CCDC60-201ENST00000327554 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms