RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PEX7O00628 323 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 SIAH2O43255 324 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 PAX1P15863 534 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 CNTFRP26992 372 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 ST6GALNAC3Q8NDV1 305 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 CMTM2Q8TAZ6 248 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 F11RQ9Y624 299 aaKnown RBP17.9■□□□□ 0.46
PNKP-201ENST00000322344 ESDP10768 282 aa17.89■□□□□ 0.46
PNKP-201ENST00000322344 NOL4LQ96MY1 436 aaPredicted RBP17.89■□□□□ 0.46
PNKP-201ENST00000322344 MUC6Q6W4X9 2439 aa17.89■□□□□ 0.45
PNKP-201ENST00000322344 SMIM27A0A1W2PRY6 76 aa17.89■□□□□ 0.45
PNKP-201ENST00000322344 ZNF705GA8MUZ8 300 aaPredicted RBP17.89■□□□□ 0.45
PNKP-201ENST00000322344 COX7A1P24310 79 aa17.89■□□□□ 0.45
PNKP-201ENST00000322344 PAFAH1B2P68402 229 aa17.89■□□□□ 0.45
PNKP-201ENST00000322344 FAM231DQ6ZW35 169 aa17.89■□□□□ 0.45
PNKP-201ENST00000322344 PRO1933Q9H354 126 aa17.89■□□□□ 0.45
PNKP-201ENST00000322344 LY6LH3BQJ8 138 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 MOSP00540 346 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 MYCNOSP40205 109 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 PLP1P60201 277 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 Q0VG73 95 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 FXYD3Q14802 87 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 LY6G5BQ8NDX9 201 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 OR1B1Q8NGR6 318 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 SRSF8Q9BRL6 282 aaKnown RBP17.88■□□□□ 0.45
PNKP-201ENST00000322344 TEX22C9J3V5 150 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 HYPMO75409 117 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 LIPFP07098 398 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 ORM2P19652 201 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 KLRB1Q12918 225 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 RAB1BQ9H0U4 201 aa17.88■□□□□ 0.45
PNKP-201ENST00000322344 GRIFINA4D1Z8 144 aa17.87■□□□□ 0.45
PNKP-201ENST00000322344 GRNP28799 593 aaKnown RBP17.87■□□□□ 0.45
PNKP-201ENST00000322344 DLX1P56177 255 aa17.87■□□□□ 0.45
PNKP-201ENST00000322344 RANP62826 216 aaKnown RBP17.87■□□□□ 0.45
PNKP-201ENST00000322344 REC114Q7Z4M0 266 aa17.87■□□□□ 0.45
PNKP-201ENST00000322344 CHRDL1Q9BU40 450 aa17.87■□□□□ 0.45
PNKP-201ENST00000322344 LAMA5O15230 3695 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 A0A1B0GUS0 222 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 TPPP2P59282 170 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 BAGE2Q86Y30 109 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 SERTAD4Q9NUC0 356 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 ROS1P08922 2347 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 NUPR1O60356 82 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 AMY1AP04745 511 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 SMIM12Q96EX1 92 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 MS4A10Q96PG2 267 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 TP53TG3Q9ULZ0 132 aa17.86■□□□□ 0.45
PNKP-201ENST00000322344 IZUMO1RA6ND01 250 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 RAB4BP61018 213 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 TMEM183BQ1AE95 376 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 TMEM136Q6ZRR5 245 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 ZNF664Q8N3J9 261 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 SRSF12Q8WXF0 261 aaKnown RBP17.85■□□□□ 0.45
PNKP-201ENST00000322344 TIMD4Q96H15 378 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 C14orf144Q96I85 54 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 LINC00479Q96M42 142 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 FBXL15Q9H469 300 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 ONECUT1Q9UBC0 465 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 NAT8BQ9UHF3 227 aa17.85■□□□□ 0.45
PNKP-201ENST00000322344 RUSC1-AS1Q66K80 236 aa17.84■□□□□ 0.45
PNKP-201ENST00000322344 EPDR1Q9UM22 224 aa17.84■□□□□ 0.45
PNKP-201ENST00000322344 HLA-DQA1P01909 254 aa17.84■□□□□ 0.45
PNKP-201ENST00000322344 TPTE2P1Q5T6R2 138 aa17.84■□□□□ 0.45
PNKP-201ENST00000322344 PCNX1Q96RV3 2341 aa17.84■□□□□ 0.45
PNKP-201ENST00000322344 PKDREJQ9NTG1 2253 aa17.83■□□□□ 0.45
PNKP-201ENST00000322344 MAP1BP46821 2468 aaKnown RBP17.83■□□□□ 0.45
PNKP-201ENST00000322344 PRB3Q04118 309 aaPredicted RBP17.83■□□□□ 0.45
PNKP-201ENST00000322344 RASL11AQ6T310 242 aa17.83■□□□□ 0.45
PNKP-201ENST00000322344 BAGE3Q86Y29 109 aa17.83■□□□□ 0.45
PNKP-201ENST00000322344 SLC25A5P05141 298 aaKnown RBP17.82■□□□□ 0.44
PNKP-201ENST00000322344 NBEAP1P0C6P0 100 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 FRMD6-AS1P0C7T7 363 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 APELAP0DMC3 54 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 TCL1AP56279 114 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 UBE2G1P62253 170 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 PLGLAQ15195 96 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 C19orf35Q6ZS72 473 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 MBD6Q96DN6 1003 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 GRAMD2BQ96HH9 432 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 A8MWP6 167 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 SERF1AO75920 110 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 SCGB1D1O95968 90 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 HTR1DP28221 377 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 ADORA2A-AS1P86434 159 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 NHLRC2Q8NBF2 726 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 OR11H6Q8NGC7 330 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 CBLN4Q9NTU7 201 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 KLF12Q9Y4X4 402 aa17.82■□□□□ 0.44
PNKP-201ENST00000322344 GP9P14770 177 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 LINC00310P59036 64 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 OR10J3Q5JRS4 329 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 BLNKQ8WV28 456 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 DPM3Q9P2X0 92 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 NAGKQ9UJ70 344 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 HIGD1AQ9Y241 93 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 TRAV34A0A0B4J273 112 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 PGPA6NDG6 321 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 SPINK4O60575 86 aa17.81■□□□□ 0.44
PNKP-201ENST00000322344 CEACAM3P40198 252 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms