RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 TXNDC17Q9BRA2 123 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 UQCC1Q9NVA1 299 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 LSM4Q9Y4Z0 139 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 ITPR3Q14573 2671 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ROS1P08922 2347 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 IGHV3OR16-10A0A075B7F0 116 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 TCRBV4S1A1TA0A5B7 111 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 K7EIM0 57 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 BMPR1BO00238 502 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ADAP1O75689 374 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 IFNA10P01566 189 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 TRGV3P03979 118 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 CNTFRP26992 372 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 RPL12P30050 165 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 EWSR1Q01844 656 aaKnown RBP eCLIP2.55□□□□□ -2
SCAMP1-201ENST00000320280 RAB32Q13637 225 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 KIAA0141Q14154 515 aaPredicted RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 GUK1Q16774 197 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 OR2B11Q5JQS5 317 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 PRR31Q5SQ13 230 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 FAM53AQ6NSI3 398 aaPredicted RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 C5orf24Q7Z6I8 188 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 LURAP1LQ8IV03 231 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 OR5AU1Q8NGC0 362 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 MRPL53Q96EL3 112 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 CLUHP3Q96NS8 147 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ARPC5LQ9BPX5 153 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ARHGAP32A7KAX9 2087 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 CSMD1Q96PZ7 3565 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 A0A087X0K7 114 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 LINC00854A0A1B0GVQ3 168 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 WI2-2373I1.2A0A1W2PRP0 233 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 NUPL2O15504 423 aaKnown RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 BCL2L11O43521 198 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SSSCA1O60232 199 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 CCNKO75909 580 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 MT-CO2P00403 227 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SEC11BP0C7V7 166 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TPPP2P59282 170 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 RHOGP84095 191 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SLC38A11Q08AI6 406 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 ZNF616Q08AN1 781 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TMEM219Q86XT9 240 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 WFDC9Q8NEX5 89 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 CYYR1Q96J86 154 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 ST6GAL2Q96JF0 529 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 RITA1Q96K30 269 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SMR3AQ99954 134 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 RNF126Q9BV68 326 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 MRPL27Q9P0M9 148 aaKnown RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 TMEM14CQ9P0S9 112 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 PRELID1Q9Y255 219 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 ABCA1O95477 2261 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TRAV14DV4A0A0A6YYC5 116 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TRAV3A0A0B4J244 114 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 A0A1B0GW64 132 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 KANTRA0A1W2PQU2 76 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SMCO3A2RU48 225 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 FCN1O00602 326 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TMEM50AO95807 157 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 IGHV3-7P01780 117 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TMEM41BQ5BJD5 291 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 C9orf66Q5T8R8 295 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SLC51BQ86UW2 128 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 PDZD9Q8IXQ8 264 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 LFNGQ8NES3 379 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 OR1B1Q8NGR6 318 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 OR2T35Q8NGX2 323 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 GRPEL2Q8TAA5 225 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 Q8WTZ3 238 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 GATAD1Q8WUU5 269 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 OR4C12Q96R67 309 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SERTM2A0A1B0GWG4 89 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 HELTA6NFD8 242 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TEX46H3BTG2 121 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 IFNA4P05014 189 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 IGLC1P0CG04 106 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 TPT1P13693 172 aaKnown RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 GNB1P62873 340 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 BLCAPP62952 87 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 KLF5Q13887 457 aaPredicted RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 PDE6HQ13956 83 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 ECSCRQ19T08 205 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 CYP2G1PQ6ZSU1 146 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 IL17RELQ6ZVW7 336 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 ZNF709Q8N972 641 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 OR51G1Q8NGK1 321 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 SCGB1C1Q8TD33 95 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 PBDC1Q9BVG4 233 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 NKX6-2Q9C056 277 aaPredicted RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 WDR61Q9GZS3 305 aaKnown RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 MBD2Q9UBB5 411 aa2.54□□□□□ -2
SCAMP1-201ENST00000320280 LSM5Q9Y4Y9 91 aaKnown RBP2.54□□□□□ -2
SCAMP1-201ENST00000320280 NAV3Q8IVL0 2385 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 TRBV7-9A0A0J9YWB2 115 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 FAM25EA8MYX2 175 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 SEC14L6B5MCN3 397 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms