RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 CGB3P0DN86 165 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 CGB7P0DN87 165 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 CRYBB3P26998 211 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 SLAQ13239 276 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 VAMP3Q15836 100 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 TNXAQ16473 311 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 OR10W1Q8NGF6 305 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 C9JCJ5 164 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 EFNB3Q15768 340 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 TBR1Q16650 682 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 LINC01560Q8TB33 94 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 TNFRSF1AP19438 455 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 LDLRAD2Q5SZI1 272 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 OR51B2Q9Y5P1 312 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 PLAUP00749 431 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 GATA4P43694 442 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 VDAC2P45880 294 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 MUC15Q8N387 334 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 OR4P4Q8NGL7 312 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 C11orf52Q96A22 123 aa12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 GSX1Q9H4S2 264 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 TECRQ9NZ01 308 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-201ENST00000319854 IGHV1-69-2A0A0G2JMI3 117 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 PRSS46E5RG02 174 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 FCN3O75636 299 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 NPY1RP25929 384 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 GRNP28799 593 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 C16orf54Q6UWD8 224 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 DDB2Q92466 427 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 FAM168AQ92567 244 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 MRPL20Q9BYC9 149 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 LOC102724200A0A096LPH7 203 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 hADV38S2A0JD32 116 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 HELTA6NFD8 242 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 J3QR06 171 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 GNG4P50150 75 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 C15orf61A6NNL5 157 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 PSG1P11464 419 aa12.61□□□□□ -0.39
SHROOM1-201ENST00000319854 TRAV9-2A0A087WT02 112 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 MT-ND6P03923 174 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 REG1AP05451 166 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 MPV17L2Q567V2 206 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 C10orf55Q5SWW7 151 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 TMEM200BQ69YZ2 307 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 OR10X1Q8NGY0 326 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 FAM222BQ8WU58 562 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 PPIAL4EA0A075B759 164 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 PPIAL4DF5H284 164 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 PPBPP02775 128 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 PPIAL4FP0DN26 164 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 IGFBP2P18065 325 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 MIR17HGQ75NE6 70 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 CST9LQ9H4G1 147 aa12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 HRNRQ86YZ3 2850 aaPredicted RBP12.6□□□□□ -0.39
SHROOM1-201ENST00000319854 LY6HO94772 140 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 APCSP02743 223 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 AMY1AP04745 511 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 HSPE1P61604 102 aaKnown RBP12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 CR1LQ2VPA4 569 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 FAM216AQ8WUB2 273 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 A0A1W2PN81 502 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 H0YJW9 148 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 IGLV2-8P01709 118 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 ZC2HC1AQ96GY0 325 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 HARBI1Q96MB7 349 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 PLEKHA3Q9HB20 300 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 SERTAD4Q9NUC0 356 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 FAM181BA6NEQ2 426 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 ENSAO43768 121 aaKnown RBP12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 GDF5OSQ5U4N7 250 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 ZNF714Q96N38 554 aa12.59□□□□□ -0.39
SHROOM1-201ENST00000319854 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 OR2T8A6NH00 312 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 TAX1BP3O14907 124 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 MPDU1O75352 247 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 GPR6P46095 362 aaPredicted RBP12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 OCIAD2Q56VL3 154 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 OR5B3Q8NH48 314 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 LSM4Q9Y4Z0 139 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms