RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 EFNB3Q15768 340 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 ZNF841Q6ZN19 808 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 TMEM144Q7Z5S9 345 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 SSBP3Q9BWW4 388 aaPredicted RBP6.15□□□□□ -1.43
TRIM55-202ENST00000315962 HIPK2Q9H2X6 1198 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 SERTAD4Q9NUC0 356 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 TCF19Q9Y242 345 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 DSCAML1Q8TD84 2053 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 NAV2Q8IVL1 2488 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 TNFRSF13BO14836 293 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-202ENST00000315962 MGST1P10620 155 aaKnown RBP6.14□□□□□ -1.43
TRIM55-202ENST00000315962 OR10J1P30954 320 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 LCN2P80188 198 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 FBXL19-AS1Q494R0 122 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 LCN12Q6JVE5 192 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 MIR17HGQ75NE6 70 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 BEND2Q8NDZ0 799 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 GOLT1BQ9Y3E0 138 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 OR51B2Q9Y5P1 312 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 KIR2DL5BA0A0G2JN68 375 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 KIR2DL5BA0A0G2JPC4 375 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 C17orf112F2Z3M2 114 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 TCF21O43680 179 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 RPLP1P05386 114 aaKnown RBP6.14□□□□□ -1.43
TRIM55-202ENST00000315962 IGFBP2P18065 325 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 CRYBB3P26998 211 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 LDLRAD2Q5SZI1 272 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 TPTE2P1Q5T6R2 138 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 CENPVQ7Z7K6 275 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-202ENST00000315962 KIR2DL5AQ8N109 375 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 LINC00479Q96M42 142 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 VAMP8Q9BV40 100 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 GGTLC1Q9BX51 225 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 RAB1BQ9H0U4 201 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 NAT8BQ9UHF3 227 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 NOTCH2Q04721 2471 aa6.14□□□□□ -1.43
TRIM55-202ENST00000315962 CA2P00918 260 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 AMTP48728 403 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 RTL8BQ17RB0 113 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 TMEM155Q4W5P6 130 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 FBLN7Q53RD9 439 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 HCP5Q6MZN7 132 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 CORO2AQ92828 525 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 FLYWCH2Q96CP2 140 aaKnown RBP6.13□□□□□ -1.43
TRIM55-202ENST00000315962 GNB4Q9HAV0 340 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 WDR83OSQ9Y284 106 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 TIMM9Q9Y5J7 89 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 NBPF19A0A087WUL8 3843 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 IGHV3OR16-10A0A075B7F0 116 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 IGHV2-26A0A0B4J1V2 119 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 H0YJW9 148 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 TYMSP04818 313 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 OR5AU1Q8NGC0 362 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 ST6GALNAC6Q969X2 333 aa6.13□□□□□ -1.43
TRIM55-202ENST00000315962 TBL2Q9Y4P3 447 aaKnown RBP6.13□□□□□ -1.43
TRIM55-202ENST00000315962 TIMM8BQ9Y5J9 83 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-202ENST00000315962 DLEU1O43261 78 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 IL6RP08887 468 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-202ENST00000315962 ZFP36P26651 326 aaKnown RBP6.12□□□□□ -1.43
TRIM55-202ENST00000315962 MEF2CQ06413 473 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-202ENST00000315962 PSG5Q15238 335 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 CENPWQ5EE01 88 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 DNLZQ5SXM8 178 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 MMD2Q8IY49 270 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 STPG3Q8N7X2 389 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 C1orf159Q96HA4 380 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 TMEM133Q9H2Q1 129 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 TEX50A0A1B0GTY4 177 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 C15orf61A6NNL5 157 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 PDE6DO43924 150 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 OR7C2O60412 319 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 VENTXO95231 258 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 GCHFRP30047 84 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 BRS3P32247 399 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 COMPP49747 757 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-202ENST00000315962 DLX6P56179 175 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 TPPP2P59282 170 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 RUSC1-AS1Q66K80 236 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 PRR27Q6MZM9 219 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 TMUB1Q9BVT8 246 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 ENY2Q9NPA8 101 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 INSIG2Q9Y5U4 225 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 A0A1W2PN81 502 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 DIRC3C9JPN6 131 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 FAM90A26D6RGX4 464 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 M0QZ24 198 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 CIDEAO60543 219 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 COL8A1P27658 744 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 SRIP30626 198 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 GPR6P46095 362 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-202ENST00000315962 PPOXP50336 477 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 OR8B3Q8NGG8 313 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 OR9G1Q8NH87 305 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 OR2T6Q8NHC8 308 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 OR8B2Q96RD0 313 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 MCRIP2Q9BUT9 160 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms