RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 TCRAP04437 139 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 CIARTQ8N365 385 aaPredicted RBP13.5□□□□□ -0.25
RUNX1-201ENST00000300305 A0A1B0GTI1 187 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 BRD3OSQ6XYD6 125 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 IGKV1-9A0A0C4DH69 117 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 PHLDA1Q8WV24 401 aaPredicted RBP13.5□□□□□ -0.25
RUNX1-201ENST00000300305 PRDM13Q9H4Q3 707 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 CXCL1P09341 107 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 DEFB121Q5J5C9 76 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 RNF182Q8N6D2 247 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 WBP1Q96G27 269 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 VGLL1Q99990 258 aa13.5□□□□□ -0.25
RUNX1-201ENST00000300305 hDV102S1A0JD36 115 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 PEMTQ9UBM1 199 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 TM4SF5O14894 197 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 IGKCP01834 107 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 ZNF236Q9UL36 1845 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 H0YIZ8 118 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 DPM2O94777 84 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 Q8TAT8 98 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 C15orf61A6NNL5 157 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 SMKR1H3BMG3 65 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 ERVK11-1P61568 191 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 LINC00312Q9Y6C7 94 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 CHD5Q8TDI0 1954 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 TIMP3P35625 211 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 EFNB3Q15768 340 aa13.49□□□□□ -0.25
RUNX1-201ENST00000300305 IQCF6A8MYZ5 107 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 SAP30O75446 220 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 CST9LQ9H4G1 147 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 ZNF138P52744 262 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.25
RUNX1-201ENST00000300305 S100A7L2Q5SY68 101 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 UBE2E2Q96LR5 201 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 TMEM8BA6NDV4 472 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 TMEM105Q8N8V8 129 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 PMS2P5A8MQ11 134 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 RALGAPA1Q6GYQ0 2036 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 PATJQ8NI35 1801 aa13.48□□□□□ -0.25
RUNX1-201ENST00000300305 LY6HO94772 140 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 PAX1P15863 534 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 BRCA1P38398 1863 aaKnown RBP13.47□□□□□ -0.25
RUNX1-201ENST00000300305 A8MXK9 166 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 ZNF497Q6ZNH5 498 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 LINC00477Q96M19 166 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 PSME4Q14997 1843 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 CSRP2Q16527 193 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 SIGLEC15Q6ZMC9 328 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BKO60814 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BJP06899 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BOP23527 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BBP33778 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BDP58876 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BCP62807 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST2H2BEQ16778 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.47□□□□□ -0.25
RUNX1-201ENST00000300305 UBE2DNLQ8IWF7 75 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 PAQR4Q8N4S7 273 aaPredicted RBP13.47□□□□□ -0.25
RUNX1-201ENST00000300305 TMEM170AQ8WVE7 144 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BHQ93079 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BNQ99877 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 HIST1H2BMQ99879 126 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 ZNF581Q9P0T4 197 aa13.47□□□□□ -0.25
RUNX1-201ENST00000300305 ASCL4Q6XD76 172 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 OR2K2Q8NGT1 345 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 C5orf30Q96GV9 206 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 CCL1P22362 96 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 SRSF6Q13247 344 aaKnown RBP13.46□□□□□ -0.25
RUNX1-201ENST00000300305 VMO1Q7Z5L0 202 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 D6R8Y8 96 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 LY6G6FQ5SQ64 297 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 NEU4Q8WWR8 484 aaPredicted RBP13.46□□□□□ -0.25
RUNX1-201ENST00000300305 TRBV6-7A0A0A0MS04 114 aa13.46□□□□□ -0.25
RUNX1-201ENST00000300305 RNF144BQ7Z419 303 aa13.46□□□□□ -0.26
RUNX1-201ENST00000300305 CEACAM1P13688 526 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 SLC25A39Q9BZJ4 359 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-201ENST00000300305 A0A087X0K7 114 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 IGFBP3P17936 291 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-201ENST00000300305 ZNF329Q86UD4 541 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 LURAP1LQ8IV03 231 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 TET1Q8NFU7 2136 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 LCN12Q6JVE5 192 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 TEX29Q8N6K0 151 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 C5orf63A6NC05 138 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 ABCA7Q8IZY2 2146 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 THBDP07204 575 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 STAG3L3P0CL85 134 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 GFI1Q99684 422 aa13.45□□□□□ -0.26
RUNX1-201ENST00000300305 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
RUNX1-201ENST00000300305 PAX8Q06710 450 aa13.44□□□□□ -0.26
RUNX1-201ENST00000300305 CYSLTR1Q9Y271 337 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms