RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 DNASE2O00115 360 aaPredicted RBP11.8□□□□□ -0.52
CCDC140-201ENST00000295226 TRGV3P03979 118 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 IFNA4P05014 189 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 KRTAP10-3P60369 221 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 RPP30P78346 268 aaKnown RBP11.8□□□□□ -0.52
CCDC140-201ENST00000295226 SLC35B1P78383 322 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 C2orf83Q53S99 150 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 TCTEX1D4Q5JR98 221 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 OR8G2PQ6IF36 304 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 ZNF114Q8NC26 417 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 C19orf24Q9BVV8 132 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 TENM1Q9UKZ4 2725 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 IGHV3-23P01764 117 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
CCDC140-201ENST00000295226 CD28P10747 220 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 PSMB8P28062 276 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 RAB9AP51151 201 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC140-201ENST00000295226 TPPP2P59282 170 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 RHOGP84095 191 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 ARL16Q0P5N6 197 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 TEX38Q6PEX7 206 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 ETV3LQ6ZN32 361 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 HAPLN4Q86UW8 402 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 WIPF2Q8TF74 440 aaPredicted RBP11.79□□□□□ -0.52
CCDC140-201ENST00000295226 EIF5A2Q9GZV4 153 aaKnown RBP11.79□□□□□ -0.52
CCDC140-201ENST00000295226 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
CCDC140-201ENST00000295226 TSPAN4O14817 238 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 FHITP49789 147 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 SLC38A11Q08AI6 406 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 TMEM147Q9BVK8 224 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 SCRT1Q9BWW7 348 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
CCDC140-201ENST00000295226 TRBV9A0A0B4J1U6 114 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 TMEM89A2RUT3 159 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 PMS2P5A8MQ11 134 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 FOXL1Q12952 345 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 AWAT1Q58HT5 328 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 OR10P1Q8NGE3 313 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 OR5B12Q96R08 314 aa11.78□□□□□ -0.52
CCDC140-201ENST00000295226 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
CCDC140-201ENST00000295226 MRPL36Q9P0J6 103 aaKnown RBP11.78□□□□□ -0.52
CCDC140-201ENST00000295226 K7EIM0 57 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 MT-CO2P00403 227 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 RAB11AP62491 216 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 FOXE3Q13461 319 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 KIAA0141Q14154 515 aaPredicted RBP11.77□□□□□ -0.53
CCDC140-201ENST00000295226 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 C18orf65Q6ZTR6 163 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.53
CCDC140-201ENST00000295226 I3L2K1 104 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 MBP02144 154 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 OPRK1P41145 380 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 PPT1P50897 306 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 RUNX1Q01196 453 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 KHDC1LQ5JSQ8 128 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 SPSB3Q6PJ21 355 aa11.76□□□□□ -0.53
CCDC140-201ENST00000295226 RBFOX3A6NFN3 312 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 ELANEP08246 267 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
CCDC140-201ENST00000295226 VWC2Q2TAL6 325 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 OR1L6Q8NGR2 347 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 MBD3L1Q8WWY6 194 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 A0A1W2PRX2 142 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 H3BUA1 57 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 ATP5G2Q06055 141 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 KLK9Q2XQG4 91 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 TMEM41BQ5BJD5 291 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 ZNF491Q8N8L2 437 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
CCDC140-201ENST00000295226 SFT2D1Q8WV19 159 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 CITED2Q99967 270 aaPredicted RBP11.75□□□□□ -0.53
CCDC140-201ENST00000295226 GGACTQ9BVM4 153 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 GNB4Q9HAV0 340 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 KLK9Q9UKQ9 250 aa11.75□□□□□ -0.53
CCDC140-201ENST00000295226 COL6A5A8TX70 2615 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 A0A1B0GUS0 222 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 TCRBV4S1A1TA0A5B7 111 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 C9JQL5 133 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 CYB5BO43169 146 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 HSPB1P04792 205 aaKnown RBP11.74□□□□□ -0.53
CCDC140-201ENST00000295226 ATP5IP56385 69 aaPredicted RBP11.74□□□□□ -0.53
CCDC140-201ENST00000295226 CD69Q07108 199 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 FAM74A3Q4VXF1 159 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 KHDC3LQ587J8 217 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 ZNF506Q5JVG8 444 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 RNF152Q8N8N0 203 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 THYN1Q9P016 225 aa11.74□□□□□ -0.53
CCDC140-201ENST00000295226 LOC105371267A0A1B0GV96 52 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms