RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 SMIM12Q96EX1 92 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 TPPP3Q9BW30 176 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 ZNF835Q9Y2P0 537 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 DYSFO75923 2080 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 TEX50A0A1B0GTY4 177 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 LIPFP07098 398 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 PRCDQ00LT1 54 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 CD69Q07108 199 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 FOXE3Q13461 319 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 FAM231DQ6ZW35 169 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 MOGAT3Q86VF5 341 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 TEX45Q8NA69 505 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 DDB2Q92466 427 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 MRPL32Q9BYC8 188 aaKnown RBP8.34□□□□□ -1.07
LMX1A-201ENST00000294816 RPP21Q9H633 154 aaKnown RBP8.34□□□□□ -1.07
LMX1A-201ENST00000294816 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 A8MWL6 223 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 C19orf24Q9BVV8 132 aa8.34□□□□□ -1.07
LMX1A-201ENST00000294816 TRGV5A0A0B4J1U4 118 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 SRRM4A7MD48 611 aaKnown RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 H3BUT2 72 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 J3QW42 95 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 UPK2O00526 184 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 NTN3O00634 580 aaPredicted RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 OR5AL1P0C617 328 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 OR1B1Q8NGR6 318 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 PTPRBP23467 1997 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 MOSP00540 346 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 RNASE2P10153 161 aaKnown RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 REG1BP48304 166 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 ERHP84090 104 aaKnown RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 LPAL2Q16609 132 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 FAM71F2Q6NXP2 309 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 TMEM105Q8N8V8 129 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 OR8A1Q8NGG7 326 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 CHCHD1Q96BP2 118 aaKnown RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 HSPB8Q9UJY1 196 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 IGHV3-21A0A0B4J1V1 117 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 SPRY3O43610 288 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 TMEM11P17152 192 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 DUX4L9Q6RFH8 374 aaPredicted RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 LINC00305Q7Z4B0 112 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 ATP5L2Q7Z4Y8 100 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
LMX1A-201ENST00000294816 SPRR3Q9UBC9 169 aa8.33□□□□□ -1.08
LMX1A-201ENST00000294816 KLRC4-KLRK1H3BQV0 150 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 CECR9P0C854 216 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
LMX1A-201ENST00000294816 TMEM97Q5BJF2 176 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 C10orf55Q5SWW7 151 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 INO80CQ6PI98 192 aaPredicted RBP8.32□□□□□ -1.08
LMX1A-201ENST00000294816 BHLHA15Q7RTS1 189 aaPredicted RBP8.32□□□□□ -1.08
LMX1A-201ENST00000294816 FER1L6-AS1Q8NA97 138 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 OR1L4Q8NGR5 311 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 EPDR1Q9UM22 224 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 IGLC1P0CG04 106 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 APELAP0DMC3 54 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 COL8A1P27658 744 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
LMX1A-201ENST00000294816 PET117Q6UWS5 81 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 GTF2H5Q6ZYL4 71 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 PILRBQ9UKJ0 227 aa8.32□□□□□ -1.08
LMX1A-201ENST00000294816 TMEM265A0A087WTH1 108 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.31□□□□□ -1.08
LMX1A-201ENST00000294816 F2RL2O00254 374 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 DLL1O00548 723 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 NHLH1Q02575 133 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 C2orf83Q53S99 150 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 SPRNQ5BIV9 151 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 PRSS3P2Q8NHM4 247 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 MAFAQ8NHW3 353 aaPredicted RBP8.31□□□□□ -1.08
LMX1A-201ENST00000294816 HARBI1Q96MB7 349 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 GPR82Q96P67 336 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 ASCL2Q99929 193 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 ZNF430Q9H8G1 570 aaPredicted RBP8.31□□□□□ -1.08
LMX1A-201ENST00000294816 ZNF318Q5VUA4 2279 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 FNDC10F2Z333 226 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 APOHP02749 345 aaPredicted RBP8.31□□□□□ -1.08
LMX1A-201ENST00000294816 PATE2Q6UY27 113 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 FA2HQ7L5A8 372 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 GCSAMQ8N6F7 178 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 H1FXQ92522 213 aaKnown RBP8.31□□□□□ -1.08
LMX1A-201ENST00000294816 ADTRPQ96IZ2 230 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 NAV3Q8IVL0 2385 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 TRAV8-1A0A0A6YYK1 113 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 PLXNB1O43157 2135 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 KLK10O43240 276 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 GOSR1O95249 250 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 C17orf58Q2M2W7 97 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 TM4SF20Q53R12 229 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 SIT1Q9Y3P8 196 aa8.31□□□□□ -1.08
LMX1A-201ENST00000294816 hADV38S2A0JD32 116 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 CRXO43186 299 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms