RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 AKIRIN1Q9H9L7 192 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-201ENST00000274071 A0A1W2PPC4 97 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 TCRBV4S1A1TA0A5B7 111 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 LTAP01374 205 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 SLC25A5P05141 298 aaKnown RBP7.52□□□□□ -1.21
PDGFC-201ENST00000274071 CSN3P07498 182 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 CD27P26842 260 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 CSN1S1P47710 185 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 PPP1CAP62136 330 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 HBBP68871 147 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 HHEXQ03014 270 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 TUSC5Q8IXB3 177 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 GJC3Q8NFK1 279 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 VCX2Q9H322 139 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 DYSFO75923 2080 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 GGTLC3B5MD39 225 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 NPIPB6E9PJ23 425 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 PRRG2O14669 202 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 P0C879 139 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 DEFB110Q30KQ9 67 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 DEFB119Q8N690 84 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 NCKAP5O14513 1909 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 A0A1W2PQD3 144 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 FRG2CA6NGY1 282 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 FNDC10F2Z333 226 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 MYF5P13349 255 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 ZNF766Q5HY98 468 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 FAM231DQ6ZW35 169 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 ABHD12Q8N2K0 398 aa7.51□□□□□ -1.21
PDGFC-201ENST00000274071 HEYLQ9NQ87 328 aaPredicted RBP7.51□□□□□ -1.21
PDGFC-201ENST00000274071 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-201ENST00000274071 ZIC3O60481 467 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 B4GALT1P15291 398 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 ERVK11-1P61568 191 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 FAM159AQ6UWV7 190 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 CNTRLQ7Z7A1 2325 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 ZBTB34Q8NCN2 500 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 OR5AN1Q8NGI8 311 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 PPP1R35Q8TAP8 253 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 C1orf159Q96HA4 380 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 AJUBAQ96IF1 538 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 ALKBH4Q9NXW9 302 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 HEATR1Q9H583 2144 aaKnown RBP7.5□□□□□ -1.21
PDGFC-201ENST00000274071 CFAP126Q5VTH2 177 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 MIR17HGQ75NE6 70 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 SDK1Q7Z5N4 2213 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 IGHV1OR15-9A0A0B4J2B8 117 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 WIPF1O43516 503 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 ZNF137PP52743 207 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 RHBDD2Q6NTF9 364 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 CEND1Q8N111 149 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 FAM169BQ8N8A8 192 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 C8orf46Q8TAG6 207 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 CHAC1Q9BUX1 264 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
PDGFC-201ENST00000274071 CEACAM4O75871 244 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 ACTL6BO94805 426 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 MEOX1P50221 254 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FBXW4P57775 412 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 ZNF816Q0VGE8 651 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-201ENST00000274071 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 LGALS9BQ3B8N2 356 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 MEIG1Q5JSS6 88 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 LGALS9CQ6DKI2 356 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 DAZAP1Q96EP5 407 aaKnown RBP7.49□□□□□ -1.21
PDGFC-201ENST00000274071 HSD17B10Q99714 261 aaKnown RBP7.49□□□□□ -1.21
PDGFC-201ENST00000274071 MAP1LC3AQ9H492 121 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 HIGD1BQ9P298 99 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 ABCA7Q8IZY2 2146 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A10PA6NDY2 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A20PA6NIJ5 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A7PA6NKC0 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A22PA8MWA6 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A12PA8MX19 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A5PA8MXJ8 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A23PA8MXZ1 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A15PP0C7V4 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A13PP0C7W8 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A14PP0C7W9 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A24PP0C7X0 464 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 IFITM1P13164 125 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 CACNG7P62955 275 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 C12orf74Q32Q52 190 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 Q6ZS92 163 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 DRAM1Q8N682 238 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 PIGCQ92535 297 aa7.49□□□□□ -1.21
PDGFC-201ENST00000274071 ASCC3Q8N3C0 2202 aaKnown RBP7.49□□□□□ -1.21
PDGFC-201ENST00000274071 LINC01548A6NM66 108 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 WISP2O76076 250 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 IGHG4P01861 327 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 APOHP02749 345 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-201ENST00000274071 TTC32Q5I0X7 151 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 ZNF503Q96F45 646 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms