RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 NSUN5P1Q3KNT7 163 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 OCC1Q8TAD7 63 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 TCRBV4S1A1TA0A5B7 111 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 PSPNO60542 156 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 CSRP1P21291 193 aaKnown RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 CRYGSP22914 178 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 TMEM167AQ8TBQ9 72 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 SOX21Q9Y651 276 aaPredicted RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 RBBP6Q7Z6E9 1792 aaKnown RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 ZNF672Q499Z4 452 aaPredicted RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 PRSS22Q9GZN4 317 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 HEATR1Q9H583 2144 aaKnown RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 DOCK6Q96HP0 2047 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 TSPAN13O95857 204 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 LINC00614P0C842 121 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 RNF144BQ7Z419 303 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 NRN1Q9NPD7 142 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 METRNQ9UJH8 293 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 PDCD11Q14690 1871 aaKnown RBP9.49□□□□□ -0.89
USP53-201ENST00000274030 ID3Q02535 119 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 PSG8Q9UQ74 426 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 CREBBPQ92793 2442 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 NPIPB5A8MRT5 1133 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 E9PLN8 166 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 GZMBP10144 247 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 VKORC1Q9BQB6 163 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 DOCK8Q8NF50 2099 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 ARFGEF3Q5TH69 2177 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 PRCDQ00LT1 54 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 KLF17Q5JT82 389 aaPredicted RBP9.49□□□□□ -0.89
USP53-201ENST00000274030 PEF1Q9UBV8 284 aaKnown RBP9.49□□□□□ -0.89
USP53-201ENST00000274030 Q0VFX4 171 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 NABP1Q96AH0 204 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 RFNGQ9Y644 331 aa9.49□□□□□ -0.89
USP53-201ENST00000274030 TRBV7-9A0A0J9YWB2 115 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 LILRA1O75019 489 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 RPL15P61313 204 aaKnown RBP9.48□□□□□ -0.89
USP53-201ENST00000274030 LY6HO94772 140 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 LINC00205P59089 165 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 FBLN5Q9UBX5 448 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 PVRIGQ6DKI7 326 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 PRDM13Q9H4Q3 707 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 MYOD1P15172 320 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 SPATA31B1PQ5VZV4 182 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 BRD3OSQ6XYD6 125 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 THADAQ6YHU6 1953 aa9.48□□□□□ -0.89
USP53-201ENST00000274030 TRAV12-3A0A0B4J271 114 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 PAX1P15863 534 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 CNTFRP26992 372 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 VCX2Q9H322 139 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 GSN-AS1Q9NRJ2 163 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 H3BRM9 83 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 GAS1P54826 345 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 PSMG4Q5JS54 123 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 IGHV3-64A0A075B6Q5 118 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 A0A087WWC5 75 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 TRAV3A0A0B4J244 114 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 TMEM200BQ69YZ2 307 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 Q6AWC8 147 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 COQ2Q96H96 371 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 ASCL2Q99929 193 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 IGHV2-26A0A0B4J1V2 119 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 PMS2P5A8MQ11 134 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 PAX8Q06710 450 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 NEUROG1Q92886 237 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 ZNF581Q9P0T4 197 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 PSME4Q14997 1843 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 IGKV2-40A0A087WW87 121 aaPredicted RBP9.47□□□□□ -0.89
USP53-201ENST00000274030 IL18BPO95998 194 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 IGKV2D-40P01614 121 aaPredicted RBP9.47□□□□□ -0.89
USP53-201ENST00000274030 EXOC3-AS1Q8N2X6 119 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
USP53-201ENST00000274030 NYNRINQ9P2P1 1898 aaKnown RBP9.47□□□□□ -0.89
USP53-201ENST00000274030 SLC50A1Q9BRV3 221 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.89
USP53-201ENST00000274030 ZNF257Q9Y2Q1 563 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 PHF3Q92576 2039 aaKnown RBP9.46□□□□□ -0.89
USP53-201ENST00000274030 SRRM5B3KS81 715 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 HGFACQ04756 655 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 CFAP161Q6P656 301 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 TREML4Q6UXN2 200 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 CD177Q8N6Q3 437 aa9.46□□□□□ -0.89
USP53-201ENST00000274030 WNT2P09544 360 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 TMEM42Q69YG0 159 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 PCNX1Q96RV3 2341 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 MALP21145 153 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 VMO1Q7Z5L0 202 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 TRGV4A0A0C4DH28 118 aa9.46□□□□□ -0.9
USP53-201ENST00000274030 LCTP09848 1927 aa9.45□□□□□ -0.9
USP53-201ENST00000274030 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms