RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 RASL11AQ6T310 242 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 TRAPPC1Q9Y5R8 145 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 ADMP35318 185 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 TMEM183BQ1AE95 376 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 PAXXQ9BUH6 204 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 RAB1BQ9H0U4 201 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 PRORYQ9H606 182 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 INSIG2Q9Y5U4 225 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 MUC6Q6W4X9 2439 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 A0A0U1RQK1 487 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 ZNF320A2RRD8 509 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 COX7A2P2O60397 106 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 IGLC1P0CG04 106 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 COX19Q49B96 90 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 OR7C2O60412 319 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 C16orf54Q6UWD8 224 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 PERPQ96FX8 193 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 MRPL27Q9P0M9 148 aaKnown RBP8.86□□□□□ -0.99
MSH3-201ENST00000265081 PRTN3P24158 256 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 TNFRSF19Q9NS68 423 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 TNCP24821 2201 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 ZFHX2Q9C0A1 2572 aaPredicted RBP8.86□□□□□ -0.99
MSH3-201ENST00000265081 A6NNC1 897 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 UBE2L3P68036 154 aaKnown RBP8.86□□□□□ -0.99
MSH3-201ENST00000265081 LINC00305Q7Z4B0 112 aa8.86□□□□□ -0.99
MSH3-201ENST00000265081 OOSP1A8MZH6 123 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 PEX7O00628 323 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 RAB4BP61018 213 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 SVILO95425 2214 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 SLC17A3O00476 420 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 PYYP10082 97 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 OR5I1Q13606 314 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 TMEM136Q6ZRR5 245 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 SRSF12Q8WXF0 261 aaKnown RBP8.85□□□□□ -0.99
MSH3-201ENST00000265081 AJUBAQ96IF1 538 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 MT-ND6P03923 174 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 TNXAQ16473 311 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 NPIPB5A8MRT5 1133 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 K7EIM0 57 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 OVOL3O00110 214 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 MRPS12O15235 138 aaKnown RBP8.85□□□□□ -0.99
MSH3-201ENST00000265081 REG1AP05451 166 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 DLX1P56177 255 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
MSH3-201ENST00000265081 OR1L6Q8NGR2 347 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 PRSS22Q9GZN4 317 aa8.85□□□□□ -0.99
MSH3-201ENST00000265081 CNOT1A5YKK6 2376 aaKnown RBP8.84□□□□□ -0.99
MSH3-201ENST00000265081 CEP250Q9BV73 2442 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 IGHV3-72A0A0B4J1Y9 119 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 LTAP01374 205 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 LURAP1LQ8IV03 231 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 IGFBPL1Q8WX77 278 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 FBLN7Q53RD9 439 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 WI2-2373I1.2A0A1W2PRP0 233 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 FCN1O00602 326 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 PKIAP61925 76 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 TIGITQ495A1 244 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 PDZD11Q5EBL8 140 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 ASPHD1Q5U4P2 390 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 OR5T1Q8NG75 326 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 RPEQ96AT9 228 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 SSBP3Q9BWW4 388 aaPredicted RBP8.84□□□□□ -0.99
MSH3-201ENST00000265081 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
MSH3-201ENST00000265081 A0A1W2PPR1 153 aa8.83□□□□□ -1
MSH3-201ENST00000265081 TIMM23O14925 209 aa8.83□□□□□ -1
MSH3-201ENST00000265081 NBR2O15453 112 aa8.83□□□□□ -1
MSH3-201ENST00000265081 CT83Q5H943 113 aa8.83□□□□□ -1
MSH3-201ENST00000265081 WDR73Q6P4I2 378 aa8.83□□□□□ -1
MSH3-201ENST00000265081 ZNF414Q96IQ9 312 aa8.83□□□□□ -1
MSH3-201ENST00000265081 MRPL18Q9H0U6 180 aaKnown RBP8.83□□□□□ -1
MSH3-201ENST00000265081 SIRPDQ9H106 197 aa8.83□□□□□ -1
MSH3-201ENST00000265081 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
MSH3-201ENST00000265081 EPDR1Q9UM22 224 aa8.83□□□□□ -1
MSH3-201ENST00000265081 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
MSH3-201ENST00000265081 IZUMO1RA6ND01 250 aa8.83□□□□□ -1
MSH3-201ENST00000265081 NPIPB6E9PJ23 425 aa8.83□□□□□ -1
MSH3-201ENST00000265081 TOMM40O96008 361 aa8.83□□□□□ -1
MSH3-201ENST00000265081 FCGR2BP31994 310 aaPredicted RBP8.83□□□□□ -1
MSH3-201ENST00000265081 ERVFC1-1P60608 527 aa8.83□□□□□ -1
MSH3-201ENST00000265081 CLEC12BQ2HXU8 276 aa8.83□□□□□ -1
MSH3-201ENST00000265081 OR10J3Q5JRS4 329 aa8.83□□□□□ -1
MSH3-201ENST00000265081 TMEM18Q96B42 140 aa8.83□□□□□ -1
MSH3-201ENST00000265081 NUPR1O60356 82 aa8.83□□□□□ -1
MSH3-201ENST00000265081 IGKV1-17P01599 117 aa8.83□□□□□ -1
MSH3-201ENST00000265081 HTR1DP28221 377 aa8.83□□□□□ -1
MSH3-201ENST00000265081 IBA57Q5T440 356 aaKnown RBP8.83□□□□□ -1
MSH3-201ENST00000265081 MINOS1Q5TGZ0 78 aa8.83□□□□□ -1
MSH3-201ENST00000265081 C19orf35Q6ZS72 473 aa8.83□□□□□ -1
MSH3-201ENST00000265081 FBXL15Q9H469 300 aa8.83□□□□□ -1
MSH3-201ENST00000265081 POLR3KQ9Y2Y1 108 aaPredicted RBP8.83□□□□□ -1
MSH3-201ENST00000265081 MINOS1-NBL1R4GNA1 71 aa8.83□□□□□ -1
MSH3-201ENST00000265081 RELNP78509 3460 aa8.82□□□□□ -1
MSH3-201ENST00000265081 ENSAO43768 121 aaKnown RBP8.82□□□□□ -1
MSH3-201ENST00000265081 MOSP00540 346 aa8.82□□□□□ -1
MSH3-201ENST00000265081 TTC9CQ8N5M4 171 aa8.82□□□□□ -1
MSH3-201ENST00000265081 GRAMD2BQ96HH9 432 aa8.82□□□□□ -1
MSH3-201ENST00000265081 FMC1Q96HJ9 113 aa8.82□□□□□ -1
MSH3-201ENST00000265081 MALRD1Q5VYJ5 2156 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms