RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 IGHV3-23P01764 117 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 RBM14Q96PK6 669 aaKnown RBP16.24■□□□□ 0.19
CSPG5-201ENST00000264723 RNF2Q99496 336 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 GBGT1Q8N5D6 347 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 VKORC1Q9BQB6 163 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 MUC21A0A0G2JKD1 596 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 MUC21A0A140T8X8 626 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 MUC21Q5SSG8 566 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 ST6GALNAC6Q969X2 333 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 CHRDL1Q9BU40 450 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 RPLP1P05386 114 aaKnown RBP16.24■□□□□ 0.19
CSPG5-201ENST00000264723 PPOXP50336 477 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 TMEM144Q7Z5S9 345 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 PRSS33Q8NF86 280 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 HIGD1AQ9Y241 93 aa16.24■□□□□ 0.19
CSPG5-201ENST00000264723 FCGR2BP31994 310 aaPredicted RBP16.23■□□□□ 0.19
CSPG5-201ENST00000264723 TLN2Q9Y4G6 2542 aa16.23■□□□□ 0.19
CSPG5-201ENST00000264723 UPK2O00526 184 aa16.23■□□□□ 0.19
CSPG5-201ENST00000264723 TAS2R60P59551 318 aa16.23■□□□□ 0.19
CSPG5-201ENST00000264723 MEF2CQ06413 473 aaPredicted RBP16.23■□□□□ 0.19
CSPG5-201ENST00000264723 TMEM200BQ69YZ2 307 aa16.23■□□□□ 0.19
CSPG5-201ENST00000264723 ERASQ7Z444 233 aa16.23■□□□□ 0.19
CSPG5-201ENST00000264723 GSX1Q9H4S2 264 aaPredicted RBP16.23■□□□□ 0.19
CSPG5-201ENST00000264723 TEX50A0A1B0GTY4 177 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 GGCTO75223 188 aaKnown RBP16.22■□□□□ 0.19
CSPG5-201ENST00000264723 SELENOTP62341 195 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 ACTL10Q5JWF8 245 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 CCDC144NLQ6NUI1 221 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 NEU1Q99519 415 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 TCF21O43680 179 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 LMO1P25800 156 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 OR5R1Q8NH85 324 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 EREGO14944 169 aa16.22■□□□□ 0.19
CSPG5-201ENST00000264723 HIST1H1EP10412 219 aaKnown RBP16.21■□□□□ 0.19
CSPG5-201ENST00000264723 TMEM177Q53S58 311 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 PRSS3P2Q8NHM4 247 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 TCF15Q12870 199 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 UTF1Q5T230 341 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 TCF24Q7RTU0 167 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 IGHV3-49A0A0A0MS15 119 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 A1L4Q6 167 aa16.21■□□□□ 0.19
CSPG5-201ENST00000264723 LOC389332A0A1B0GUA5 103 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 LY6EQ16553 131 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.2■□□□□ 0.18
CSPG5-201ENST00000264723 CGB1A6NKQ9 187 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 UNQ5815/PRO19632Q6UWF5 114 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 NRN1Q9NPD7 142 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 DPM3Q9P2X0 92 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 TMEM178BH3BS89 294 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 HLA-DQA1P01909 254 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 STXBP6Q8NFX7 210 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 GAFA1Q96PS6 74 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 ASCL2Q99929 193 aa16.2■□□□□ 0.18
CSPG5-201ENST00000264723 FOSL1P15407 271 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 PTTG1IPP53801 180 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 C11orf42Q8N5U0 333 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 DKK4Q9UBT3 224 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 C15orf65H3BRN8 121 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 ZNF672Q499Z4 452 aaPredicted RBP16.19■□□□□ 0.18
CSPG5-201ENST00000264723 TMEM133Q9H2Q1 129 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 LCN12Q6JVE5 192 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 GOLT1AQ6ZVE7 132 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 NUPR1O60356 82 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 AMY1AP04745 511 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 ATP5J2P56134 94 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 FA2HQ7L5A8 372 aa16.19■□□□□ 0.18
CSPG5-201ENST00000264723 SFTPCP11686 197 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 S100A4P26447 101 aaKnown RBP16.18■□□□□ 0.18
CSPG5-201ENST00000264723 MAS1LP35410 378 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 MT-ND6P03923 174 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 NBEAP1P0C6P0 100 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 PMCHL1Q16048 86 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 C19orf35Q6ZS72 473 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 OR4A5Q8NH83 315 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 PMCHL2Q9BQD1 86 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 SLC25A33Q9BSK2 321 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 CPAMD8Q8IZJ3 1885 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 IL4P05112 153 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 ZNF788Q6ZQV5 615 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 GOLT1BQ9Y3E0 138 aa16.18■□□□□ 0.18
CSPG5-201ENST00000264723 PRCDQ00LT1 54 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 CD69Q07108 199 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 LOC102724200A0A096LPH7 203 aaPredicted RBP16.17■□□□□ 0.18
CSPG5-201ENST00000264723 CBY3A6NI87 242 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 E7EQL1 145 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 F2Z2F3 143 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 FOXL1Q12952 345 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 HIGD1CA8MV81 97 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 A8MWP6 167 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 ORM1P02763 201 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 FRMD6-AS1P0C7T7 363 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 CLEC2AQ6UVW9 174 aa16.17■□□□□ 0.18
CSPG5-201ENST00000264723 USP9YO00507 2555 aaPredicted RBP16.17■□□□□ 0.18
CSPG5-201ENST00000264723 PEX7O00628 323 aa16.16■□□□□ 0.18
CSPG5-201ENST00000264723 VDAC2P45880 294 aaPredicted RBP16.16■□□□□ 0.18
CSPG5-201ENST00000264723 ZFYVE26Q68DK2 2539 aa16.16■□□□□ 0.18
CSPG5-201ENST00000264723 OR2J3O76001 311 aa16.16■□□□□ 0.18
CSPG5-201ENST00000264723 BRWD1-AS2P59051 145 aa16.16■□□□□ 0.18
CSPG5-201ENST00000264723 FRYQ5TBA9 3013 aa16.16■□□□□ 0.18
CSPG5-201ENST00000264723 SETD2Q9BYW2 2564 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms