RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 LINC00470Q9BZP3 86 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 RAB9BQ9NP90 201 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 RNF114Q9Y508 228 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 IGKV1D-17A0A075B6S4 117 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 GCSHP23434 173 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 FOXL1Q12952 345 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 ZNF146Q15072 292 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 BPIFA4PQ86YQ2 179 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 C1orf174Q8IYL3 243 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 TSKUQ8WUA8 353 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 TMEM70Q9BUB7 260 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 GGTLC3B5MD39 225 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 PEX7O00628 323 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 PSG1P11464 419 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 DIAPH2-AS1Q14236 149 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 TRAV17A0A0B4J275 112 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 FCGR2BP31994 310 aaPredicted RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 FBLN7Q53RD9 439 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 Q5PR19 223 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 RPEQ96AT9 228 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 INSIG2Q9Y5U4 225 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 OR2T8A6NH00 312 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 DAZAP2Q15038 168 aaPredicted RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 TRIP6Q15654 476 aaKnown RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 Q6ZT83 130 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 MTURNQ8N3F0 131 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 GCSAMQ8N6F7 178 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 SLC25A33Q9BSK2 321 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 GP6Q9HCN6 339 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 APOHP02749 345 aaPredicted RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 MT-ND6P03923 174 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 CLEC3BP05452 202 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 MBNL2Q5VZF2 373 aaKnown RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 RNASE8Q8TDE3 154 aaKnown RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 IFI27L2Q9H2X8 130 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 FBXL15Q9H469 300 aa8.29□□□□□ -1.08
PALB2-201ENST00000261584 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
PALB2-201ENST00000261584 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.28□□□□□ -1.08
PALB2-201ENST00000261584 ARF6P62330 175 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 LRRC10Q5BKY1 277 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 TPTE2P1Q5T6R2 138 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 FAM90A1Q86YD7 464 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 NUP35Q8NFH5 326 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 THYN1Q9P016 225 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 MUC6Q6W4X9 2439 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 A8MWL6 223 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 ZNF207O43670 478 aaKnown RBP8.28□□□□□ -1.08
PALB2-201ENST00000261584 TSPOP30536 169 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 RPL15P61313 204 aaKnown RBP8.28□□□□□ -1.08
PALB2-201ENST00000261584 VWC2Q2TAL6 325 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 RNASEH2CQ8TDP1 164 aaKnown RBP8.28□□□□□ -1.08
PALB2-201ENST00000261584 IDI2-AS1Q9NZ38 188 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 JPT1Q9UK76 154 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 FAM90A27PA6NNH2 459 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 H3BUT2 72 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 K7EMI3 77 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 LY6HO94772 140 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 LCNL1Q6ZST4 164 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 RASL11BQ9BPW5 248 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 DMXL2Q8TDJ6 3036 aa8.28□□□□□ -1.08
PALB2-201ENST00000261584 ARHGAP32A7KAX9 2087 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 TRGV8A0A0C4DH27 118 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 IQCF6A8MYZ5 107 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 DKK1O94907 266 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 NCR2O95944 276 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 IGLL1P15814 213 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 CD40P25942 277 aa8.27□□□□□ -1.08
PALB2-201ENST00000261584 ZNF430Q9H8G1 570 aaPredicted RBP8.27□□□□□ -1.08
PALB2-201ENST00000261584 NACAE9PAV3 2078 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 IGHV1-18A0A0C4DH31 117 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 TEX50A0A1B0GTY4 177 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.27□□□□□ -1.09
PALB2-201ENST00000261584 K7EQM0 130 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 PRSS57Q6UWY2 283 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 ZFP30Q9Y2G7 519 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 ANKRD11Q6UB99 2663 aaPredicted RBP8.27□□□□□ -1.09
PALB2-201ENST00000261584 SRRM4A7MD48 611 aaKnown RBP8.27□□□□□ -1.09
PALB2-201ENST00000261584 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 M0R3E3 92 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 TGFAP01135 160 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 CSN1S1P47710 185 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 TEX45Q8NA69 505 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 MBNL3Q9NUK0 354 aaKnown RBP8.27□□□□□ -1.09
PALB2-201ENST00000261584 NUP210LQ5VU65 1888 aa8.27□□□□□ -1.09
PALB2-201ENST00000261584 MUC3AQ02505 3323 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 IGKV3D-15A0A087WSY6 115 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 FAM181BA6NEQ2 426 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 TWIST1Q15672 202 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 OR4F17Q8NGA8 305 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 PERPQ96FX8 193 aa8.26□□□□□ -1.09
PALB2-201ENST00000261584 ZNF714Q96N38 554 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms