RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IGFL2Q6UWQ7 119 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 LHFPL1Q86WI0 220 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 ZNF645Q8N7E2 425 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 DEFB118Q96PH6 123 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 PRRG4Q9BZD6 226 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 TRAV13-1A0A0B4J241 112 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 C3orf85A0A1B0GTC6 90 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 TEX50A0A1B0GTY4 177 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 GYPBP06028 91 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 NPPCP23582 126 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 HERV-K104P61576 105 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 RRN3P1Q2M238 152 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 Q96M85 177 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
GPNMB-201ENST00000258733 LSM7Q9UK45 103 aaKnown RBP6.27□□□□□ -1.41
GPNMB-201ENST00000258733 C5orf63A6NC05 138 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 SHISA9B4DS77 424 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 PRRG2O14669 202 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 CST7O76096 145 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 AMY1AP04745 511 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 PLGLB1Q02325 96 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 KLF5Q13887 457 aaPredicted RBP6.26□□□□□ -1.41
GPNMB-201ENST00000258733 RTL8BQ17RB0 113 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 RSPO1Q2MKA7 263 aaPredicted RBP6.26□□□□□ -1.41
GPNMB-201ENST00000258733 LINC01465Q8N7H1 131 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 OR10AC1Q8NH08 325 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 FAM57AQ8TBR7 257 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 NABP1Q96AH0 204 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 HHLA3Q9XRX5 114 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 RENP00797 406 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 PRNPP04156 253 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 ZGLP1P0C6A0 271 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 ZNF136P52737 540 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 FKBP1BP68106 108 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
GPNMB-201ENST00000258733 AAED1Q7RTV5 226 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 TBC1D26Q86UD7 250 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 LINC00311Q8N616 119 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 FGF14Q92915 247 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 C11orf1Q9H5F2 150 aa6.26□□□□□ -1.41
GPNMB-201ENST00000258733 HEATR1Q9H583 2144 aaKnown RBP6.26□□□□□ -1.41
GPNMB-201ENST00000258733 C15orf61A6NNL5 157 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 Q6ZS49 121 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 WFDC11Q8NEX6 87 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 ODF3Q96PU9 254 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 TRIP12Q14669 1992 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-201ENST00000258733 PCSK5Q92824 1860 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 LINC01548A6NM66 108 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 C16orf97H3BN30 126 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 SPINK4O60575 86 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 NDUFC2O95298 119 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 AVPP01185 164 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 COX7CP15954 63 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 GRNP28799 593 aaKnown RBP6.25□□□□□ -1.41
GPNMB-201ENST00000258733 Q8NA96 180 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 BMFQ96LC9 184 aa6.25□□□□□ -1.41
GPNMB-201ENST00000258733 TRAV27A0A087WT01 109 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 A8MWV9 139 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 C11orf94C9JXX5 98 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 K7ESM1 405 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 EFNA2O43921 213 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 SERF2P84101 59 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 SPACA3Q8IXA5 215 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 FAM60AQ9NP50 221 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 TRAV2A0A0B4J234 112 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 IGHV1-24A0A0C4DH33 117 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 OR5AL1P0C617 328 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 GNB1P62873 340 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 TRIP6Q15654 476 aaKnown RBP6.24□□□□□ -1.41
GPNMB-201ENST00000258733 MOB3BQ86TA1 216 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 SCAMP4Q969E2 229 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 GPHA2Q96T91 129 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 TCRBV4S1A1TA0A5B7 111 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 CRYM-AS1A6NIL9 109 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 H3BS24 57 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 K7EM74 188 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 HSPB6O14558 160 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 NDUFB4O95168 129 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 HOXB4P17483 251 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-201ENST00000258733 C12orf74Q32Q52 190 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 LYZL2Q7Z4W2 148 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 GTSCR1Q86UQ5 136 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 CXorf67Q86X51 503 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-201ENST00000258733 NPIPB3Q92617 1050 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 HIGD1BQ9P298 99 aa6.24□□□□□ -1.41
GPNMB-201ENST00000258733 PLXNB2O15031 1838 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 PTPRSQ13332 1948 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 TRGV11A0A075B6L2 103 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 TMSB15BA0A087X1C1 80 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 FAM72CH0Y354 149 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 P01737 135 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 HLA-DOBP13765 273 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 PEBP1P30086 187 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms