RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 OR2J3O76001 311 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 HOXC12P31275 282 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 PRR20EP86478 221 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 PRR20CP86479 221 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 PRR20DP86480 221 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 PRR20BP86481 221 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 PRR20AP86496 221 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 OR2K2Q8NGT1 345 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 PERPQ96FX8 193 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 THYN1Q9P016 225 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 CHD8Q9HCK8 2581 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 C9orf118A6NHY6 69 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 K7EP34 96 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 CEACAM4O75871 244 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 MEF2CQ06413 473 aaPredicted RBP12.87□□□□□ -0.35
DDX1-201ENST00000233084 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 TEX45Q8NA69 505 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 FAM173AQ9BQD7 235 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
DDX1-201ENST00000233084 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 ERVK-16P61578 105 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 IGFL2Q6UWQ7 119 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 A0A0G2JLM5 398 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
DDX1-201ENST00000233084 WISP2O76076 250 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 SP1P08047 785 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 GPR12P47775 334 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 RTL8AQ9BWD3 113 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 TMEM140Q9NV12 185 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 IDI2-AS1Q9NZ38 188 aa12.86□□□□□ -0.35
DDX1-201ENST00000233084 PTPRQQ9UMZ3 2332 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 DNPH1O43598 174 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 PROP1O75360 226 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 COX8AP10176 69 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 PLP2Q04941 152 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 RPL39P5Q59GN2 51 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 MORN5Q5VZ52 161 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 ZNF826PQ6ZT77 177 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 DKK4Q9UBT3 224 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 SLC25A10Q9UBX3 287 aaPredicted RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 TMEM238LA0A1B0GVL6 79 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 APOBEC3AP31941 199 aaPredicted RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 REG1BP48304 166 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 SEC11AP67812 179 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 JKAMPQ9P055 326 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 BOKQ9UMX3 212 aaPredicted RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 AMMECR1Q9Y4X0 333 aaPredicted RBP12.85□□□□□ -0.35
DDX1-201ENST00000233084 DNAJC13O75165 2243 aa12.85□□□□□ -0.35
DDX1-201ENST00000233084 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
DDX1-201ENST00000233084 KIR3DS1Q14943 382 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 MLANAQ16655 118 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
DDX1-201ENST00000233084 COQ2Q96H96 371 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 SH3BGRL2Q9UJC5 107 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 POLDIP2Q9Y2S7 368 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 SPCS1Q9Y6A9 102 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 IGKV1OR2-108A0A075B7D4 117 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 PPIAL4CA0A0B4J2A2 164 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 ERVK11-1P61568 191 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 ZNF146Q15072 292 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 ALKBH6Q3KRA9 238 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 WDR31Q8NA23 367 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 LRRC29Q8WV35 223 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 TTTY12Q9BZ98 90 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 MS4A6AQ9H2W1 248 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 C1RLQ9NZP8 487 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 RABAC1Q9UI14 185 aa12.84□□□□□ -0.35
DDX1-201ENST00000233084 KLF13Q9Y2Y9 288 aaPredicted RBP12.84□□□□□ -0.35
DDX1-201ENST00000233084 PYYP10082 97 aa12.83□□□□□ -0.35
DDX1-201ENST00000233084 GDF1P27539 372 aa12.83□□□□□ -0.35
DDX1-201ENST00000233084 HBBP68871 147 aa12.83□□□□□ -0.35
DDX1-201ENST00000233084 EDDM3AQ14507 147 aa12.83□□□□□ -0.35
DDX1-201ENST00000233084 HEATR1Q9H583 2144 aaKnown RBP12.83□□□□□ -0.36
DDX1-201ENST00000233084 DSPP15924 2871 aaKnown RBP12.83□□□□□ -0.36
DDX1-201ENST00000233084 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 LIPFP07098 398 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 MEOX1P50221 254 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 GNG5P63218 68 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 ZNF766Q5HY98 468 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 CHCHD1Q96BP2 118 aaKnown RBP12.83□□□□□ -0.36
DDX1-201ENST00000233084 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
DDX1-201ENST00000233084 A6NDN8 102 aa12.82□□□□□ -0.36
DDX1-201ENST00000233084 H3BRM9 83 aa12.82□□□□□ -0.36
DDX1-201ENST00000233084 SMPD2O60906 423 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms