RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 LOC102723996A0A087X1L8 192 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 CEACAM1P13688 526 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 MTURNQ8N3F0 131 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 TRAV8-2A0A0B4J237 113 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 A0A0G2JLM5 398 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 A0A1W2PRE2 83 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 PAX1P15863 534 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 FXYD7P58549 80 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 C7orf69Q9H7B7 122 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 FAM168AQ92567 244 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 IGKV2-40A0A087WW87 121 aaPredicted RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 MLNRO43193 412 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 GFRA3O60609 400 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 DPM2O94777 84 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 IGKV2D-40P01614 121 aaPredicted RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 PVRIGQ6DKI7 326 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 GBF1Q92538 1859 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 TRAV3A0A0B4J244 114 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 TRBV7-9A0A0J9YWB2 115 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 ZNF585BQ52M93 769 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 MGST2Q99735 147 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 GGTLC1Q9BX51 225 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 FOXF2Q12947 444 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 TSKUQ8WUA8 353 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 GTF3AQ92664 365 aaKnown RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 RP1L1Q8IWN7 2480 aaPredicted RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 PTPRZ1P23471 2315 aaPredicted RBP11.07□□□□□ -0.64
NEK4-201ENST00000233027 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 CLPSP04118 112 aa11.07□□□□□ -0.64
NEK4-201ENST00000233027 MYOD1P15172 320 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 NUTF2P61970 127 aaKnown RBP11.06□□□□□ -0.64
NEK4-201ENST00000233027 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEK4-201ENST00000233027 BMPERQ8N8U9 685 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 TIMM23O14925 209 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 IGKCP01834 107 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 RHOGP84095 191 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 ANK1P16157 1881 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 GGNQ86UU5 652 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 ASCL2Q99929 193 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 LINC00527Q9UJ94 153 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 IGHV1-46P01743 117 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 CNTFRP26992 372 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 EXOC3-AS1Q8N2X6 119 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 NCR2O95944 276 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 ORAOV1Q8WV07 137 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 SEPSECSQ9HD40 501 aaKnown RBP11.06□□□□□ -0.64
NEK4-201ENST00000233027 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
NEK4-201ENST00000233027 LDLRAD2Q5SZI1 272 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 C8orf46Q8TAG6 207 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 OR4X2Q8NGF9 303 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 VCX2Q9H322 139 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
NEK4-201ENST00000233027 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
NEK4-201ENST00000233027 HTN3P15516 51 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 CD33P20138 364 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 LINC00205P59089 165 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 CSRP2Q16527 193 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
NEK4-201ENST00000233027 LILRA1O75019 489 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 TDGF1P13385 188 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 PSPNO60542 156 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 IGKV1-5P01602 117 aa11.05□□□□□ -0.64
NEK4-201ENST00000233027 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
NEK4-201ENST00000233027 ZNF883P0CG24 379 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 CABIN1Q9Y6J0 2220 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 RPL15P61313 204 aaKnown RBP11.04□□□□□ -0.64
NEK4-201ENST00000233027 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 SCRT1Q9BWW7 348 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 TRBV24-1A0A075B6N3 115 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 IFI27P40305 119 aaPredicted RBP11.04□□□□□ -0.64
NEK4-201ENST00000233027 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 ZNF815PA8K554 130 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 PAX2Q02962 417 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 GTSCR1Q86UQ5 136 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 TNFSF13O75888 250 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
NEK4-201ENST00000233027 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
NEK4-201ENST00000233027 PMS2P5A8MQ11 134 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 NPC2P61916 151 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 LINC01551Q86U37 167 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 CD177Q8N6Q3 437 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 hDV102S1A0JD36 115 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 TMEM105Q8N8V8 129 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 LSM4Q9Y4Z0 139 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms