RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PRR33A8MZF0 331 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 FGF6P10767 208 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 Q6ZS49 121 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 C11orf52Q96A22 123 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 ZNF488Q96MN9 340 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 BOD1L1Q8NFC6 3051 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 C3orf80F5H4A9 247 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 HSPB6O14558 160 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 WISP2O76076 250 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 IGKV1-39P01597 117 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 MT-ATP8P03928 68 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 IGKV1D-39P04432 117 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 CFHR2P36980 270 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 INSL3P51460 131 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 ZNF718Q3SXZ3 478 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 SPATA46Q5T0L3 261 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 FDCSPQ8NFU4 85 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 ARPC1AQ92747 370 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
GABPB1-201ENST00000220429 PTPRBP23467 1997 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 TUSC2O75896 110 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 IGKV1-5P01602 117 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 SMIM13P0DJ93 91 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.63
GABPB1-201ENST00000220429 CCL11P51671 97 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.63
GABPB1-201ENST00000220429 DDB2Q92466 427 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 C20orf78Q9BR46 151 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 C1QTNF4Q9BXJ3 329 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 OR1A1Q9P1Q5 309 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 MPC1Q9Y5U8 109 aa11.15□□□□□ -0.63
GABPB1-201ENST00000220429 CXorf1O96002 111 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 SCTP09683 121 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 KCNS2Q9ULS6 477 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 SVILO95425 2214 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 CA6P23280 308 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 ATP5J2P56134 94 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 RAB1BQ9H0U4 201 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 CDIP1Q9H305 208 aa11.14□□□□□ -0.63
GABPB1-201ENST00000220429 A1L4Q6 167 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 OR2J3O76001 311 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 GNG3P63215 75 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 PQLC2Q6ZP29 291 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
GABPB1-201ENST00000220429 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
GABPB1-201ENST00000220429 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 RRHO14718 337 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 IGHG3P01860 377 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 IGHV1-2P23083 117 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 VDAC2P45880 294 aaPredicted RBP11.13□□□□□ -0.63
GABPB1-201ENST00000220429 EDDM3BP56851 147 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 LINC01545Q5VT33 79 aa11.13□□□□□ -0.63
GABPB1-201ENST00000220429 hADV38S2A0JD32 116 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 PMS2P5A8MQ11 134 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 GPR12P47775 334 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 MFAP2P55001 183 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
GABPB1-201ENST00000220429 ZNF645Q8N7E2 425 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 TEX45Q8NA69 505 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 OR5AL1P0C617 328 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 KLRD1Q13241 179 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 C20orf204Q6ZNR8 217 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 Q8N7P7 452 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 SYT8Q8NBV8 401 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 OR9G4Q8NGQ1 327 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 GTSF1Q8WW33 167 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 ATP23Q9Y6H3 246 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 ZNF292O60281 2723 aa11.12□□□□□ -0.63
GABPB1-201ENST00000220429 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 LYZL6O75951 148 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 RPS16P62249 146 aaKnown RBP11.11□□□□□ -0.63
GABPB1-201ENST00000220429 TIGITQ495A1 244 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 Q6ZUT4 128 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 PKIBQ9C010 78 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 PDLIM3Q53GG5 364 aaPredicted RBP11.11□□□□□ -0.63
GABPB1-201ENST00000220429 IGFL2Q6UWQ7 119 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 WDR86Q86TI4 376 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 LINC00596Q86U02 117 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 TRIB1Q96RU8 372 aa11.11□□□□□ -0.63
GABPB1-201ENST00000220429 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 KIR2DS1A0A191URI9 304 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms