RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PLP1P60201 277 aa15.65■□□□□ 0.1
SMPD3-201ENST00000219334 TTC9CQ8N5M4 171 aa15.65■□□□□ 0.1
SMPD3-201ENST00000219334 TEX38Q6PEX7 206 aa15.65■□□□□ 0.1
SMPD3-201ENST00000219334 MBNL3Q9NUK0 354 aaKnown RBP15.65■□□□□ 0.1
SMPD3-201ENST00000219334 JKAMPQ9P055 326 aa15.65■□□□□ 0.1
SMPD3-201ENST00000219334 ARHGEF17Q96PE2 2063 aaPredicted RBP15.65■□□□□ 0.1
SMPD3-201ENST00000219334 HIGD1CA8MV81 97 aa15.65■□□□□ 0.1
SMPD3-201ENST00000219334 WNK3Q9BYP7 1800 aa15.65■□□□□ 0.1
SMPD3-201ENST00000219334 IZUMO1RA6ND01 250 aa15.64■□□□□ 0.1
SMPD3-201ENST00000219334 MST1P26927 711 aa15.64■□□□□ 0.1
SMPD3-201ENST00000219334 SPSB3Q6PJ21 355 aa15.64■□□□□ 0.1
SMPD3-201ENST00000219334 PYYP10082 97 aa15.64■□□□□ 0.09
SMPD3-201ENST00000219334 SRP19P09132 144 aaKnown RBP15.64■□□□□ 0.09
SMPD3-201ENST00000219334 OR10W1Q8NGF6 305 aa15.64■□□□□ 0.09
SMPD3-201ENST00000219334 DOCK6Q96HP0 2047 aa15.64■□□□□ 0.09
SMPD3-201ENST00000219334 A0A1W2PRE2 83 aa15.64■□□□□ 0.09
SMPD3-201ENST00000219334 BPESC1Q9GZL8 116 aa15.64■□□□□ 0.09
SMPD3-201ENST00000219334 PSME4Q14997 1843 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 IGKV1-12A0A0C4DH73 117 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 DPRXA6NFQ7 191 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 IGKV1D-12P01611 117 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 CCL20P78556 96 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 WFDC12Q8WWY7 111 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 NEUROG1Q92886 237 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 OTOFQ9HC10 1997 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 NDUFS8O00217 210 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 GHRHP01286 108 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 PRADC1Q9BSG0 188 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 TCF21O43680 179 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 XIRP1Q702N8 1843 aaKnown RBP15.63■□□□□ 0.09
SMPD3-201ENST00000219334 TRAV9-1A0A075B6T8 112 aa15.63■□□□□ 0.09
SMPD3-201ENST00000219334 A0A087WX48 190 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 IGKV3D-20A0A0C4DH25 116 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 CD55P08174 381 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 C10orf55Q5SWW7 151 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 TBL2Q9Y4P3 447 aaKnown RBP15.62■□□□□ 0.09
SMPD3-201ENST00000219334 PRR32B1ATL7 298 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 COTL1Q14019 142 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 ABCA1O95477 2261 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 KLHL30-AS1Q8NEE0 82 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 ARID2Q68CP9 1835 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 CD177Q8N6Q3 437 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 TRPM7Q96QT4 1865 aa15.62■□□□□ 0.09
SMPD3-201ENST00000219334 GPR179Q6PRD1 2367 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 C5orf64Q2M2E5 130 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 RNF166Q96A37 237 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 SMIM13P0DJ93 91 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 GREB1LQ9C091 1923 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 SPTAN1Q13813 2472 aaKnown RBP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 SRSF7Q16629 238 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 LCNL1Q6ZST4 164 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 ZNF98A6NK75 572 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 J3QKU1 62 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 PSPNO60542 156 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 KIR3DL3Q8N743 410 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 IMMP2LQ96T52 175 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 SDHCQ99643 169 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 RNF223E7ERA6 249 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 SLC25A20O43772 301 aa15.61■□□□□ 0.09
SMPD3-201ENST00000219334 ZNF474Q6S9Z5 364 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 MRPL16Q9NX20 251 aaKnown RBP15.61■□□□□ 0.09
SMPD3-201ENST00000219334 EFNB1P98172 346 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 ID3Q02535 119 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 MYO7BQ6PIF6 2116 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 DIDO1Q9BTC0 2240 aaKnown RBP15.6■□□□□ 0.09
SMPD3-201ENST00000219334 ERVH48-1M5A8F1 160 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 SLC25A48Q6ZT89 311 aaKnown RBP15.6■□□□□ 0.09
SMPD3-201ENST00000219334 USMG5Q96IX5 58 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 COL8A2P25067 703 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 NUDT11Q96G61 164 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 A0A087WV48 116 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 SEPSECSQ9HD40 501 aaKnown RBP15.6■□□□□ 0.09
SMPD3-201ENST00000219334 CYSLTR1Q9Y271 337 aa15.6■□□□□ 0.09
SMPD3-201ENST00000219334 TRBV7-1A0A0A6YYK4 115 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 C1QTNF9BB2RNN3 333 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 NDUFA3O95167 84 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 PPIFP30405 207 aaKnown RBP15.59■□□□□ 0.09
SMPD3-201ENST00000219334 WDR83OSQ9Y284 106 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 ADARB2-AS1A8MUL3 147 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 TMEM155Q4W5P6 130 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 ROS1P08922 2347 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 NBASA2RRP1 2371 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 A0A1B0GWJ7 208 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 SRSF1Q07955 248 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMPD3-201ENST00000219334 EFNB3Q15768 340 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 C1QTNF4Q9BXJ3 329 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 PGPEP1Q9NXJ5 209 aa15.59■□□□□ 0.09
SMPD3-201ENST00000219334 ZNF688P0C7X2 276 aa15.58■□□□□ 0.09
SMPD3-201ENST00000219334 RPL35AP18077 110 aaKnown RBP15.58■□□□□ 0.09
SMPD3-201ENST00000219334 Q5PR19 223 aa15.58■□□□□ 0.09
SMPD3-201ENST00000219334 RNASE7Q9H1E1 156 aaKnown RBP15.58■□□□□ 0.09
SMPD3-201ENST00000219334 BUB1B-PAK6H3BSN5 160 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 SELENOKQ9Y6D0 94 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 A0A0A6YYD4 124 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 PPBPP02775 128 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 GATA3P23771 443 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 ZNF329Q86UD4 541 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 RCHY1Q96PM5 261 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 GAFA1Q96PS6 74 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms