RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 CamlgP49070 294 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Lcn12Q6JVL5 193 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 PurgQ8R4E6 350 aaKnown RBP17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr1151Q8VFQ8 308 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr979Q8VH10 311 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 RbpmsQ9WVB0 197 aaKnown RBP17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 FlncQ8VHX6 2726 aaKnown RBP17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr1158A2BHP7 313 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm9970F6ZED4 185 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Efnb2P52800 336 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr1211Q7TR09 311 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 ClmQ7TSN2 230 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 9130230L23RikQ8CC80 163 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Golt1aQ9DCQ3 133 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ndufb10Q9DCS9 176 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Rcl1Q9JJT0 373 aaKnown RBP17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Wrap73Q9JM98 462 aa17.45■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Prr23a2D3YWX5 253 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm2174F6ZVF2 133 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Iglc3P01845 104 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 LtbP41155 306 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr1465Q7TQR2 307 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr1396Q7TQS8 315 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr452Q7TRV8 317 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 LipkQ8BM14 398 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Plppr2Q8VCY8 343 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr472Q8VG43 310 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr38Q8VGP4 317 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Plrg1Q922V4 513 aaKnown RBP17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 ChodlQ9CXM0 273 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Fhl3Q9R059 289 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Utp20Q5XG71 2788 aaKnown RBP17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm15128A2ADW8 449 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm15093A2BI72 449 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Luzp4B1AV09 449 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm15107B1B0X0 449 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm15114B1B0X6 433 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm15097E9QA14 449 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr635K7N6B1 321 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 B4galt1P15535 399 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gpr12P35412 334 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Lhx4P53776 390 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Trdv4Q5R1A3 115 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Fxyd3Q61835 88 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm15085Q62012 449 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Lyrm2Q8R033 88 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr167Q8VGJ5 312 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Med30Q9CQI9 178 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Tex37Q9DAG4 180 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 PyyQ9EPS2 98 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Suv39h2Q9EQQ0 477 aa17.44■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 H2-M5A7VMS3 348 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 G530012D18RikJ3QK25 139 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Cd200O54901 278 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Tcrg-V1P06325 135 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 YrdcQ3U5F4 280 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 HykkQ5U5V2 376 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ceacam9Q78T27 234 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Lrtm2Q8BGX3 370 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Dmrtc2Q8CGW9 370 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Nmnat3Q99JR6 245 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Atp6v1g1Q9CR51 118 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Tmem219Q9D123 240 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Fam3bQ9D309 235 aa17.43■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ighv9-3A0A0B4J1J5 117 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Tnfaip6O08859 275 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Mtnd6P03925 172 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Rab7aP51150 207 aaKnown RBP17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Fndc4Q3TR08 231 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Tmprss13Q5U405 543 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Foxb2Q64733 428 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Nmes1Q810Q5 83 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ptrh2Q8R2Y8 181 aaKnown RBP17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Rbpms2Q8VC52 206 aaKnown RBP17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Rnaseh2cQ9CQ18 166 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 HpgdsQ9JHF7 199 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Calm4Q9JM83 148 aa17.42■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ighv5-8A0A075B676 92 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Trbv26A0A0B4J1P5 115 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Igsf23B2RTN2 239 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Fam98cE9PYD1 344 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Gm5458L7N219 204 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 P01759 136 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ear1P97426 155 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Slc39a7Q31125 476 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Zfp663Q6NXM6 656 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Sytl3Q99N48 607 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 H2afb1Q9CQ70 111 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Rpp14Q9CQH8 122 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Cyb5bQ9CQX2 146 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Aifm1Q9Z0X1 612 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 OpcmlG5E8G3 345 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Lyz1P17897 148 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 VhlP40338 181 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Rpl30P62889 115 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Znf575Q3TXZ1 239 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Arl6ip6Q8BH07 226 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Dcun1d4Q8CCA0 292 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr492Q8VFD1 314 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr1462Q8VFW3 307 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms