RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tfb1mQ8JZM0 345 aaKnown RBP7.45□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr134Q8VG95 312 aa7.45□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Q9DAN9 164 aa7.45□□□□□ -1.22
Upf3b-201ENSMUST00000076265 DmdP11531 3678 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zfhx2Q2MHN3 2562 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ighv11-2A0A075B5R8 117 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ighv1-22A0A075B5U7 117 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr587-ps1A0A1B0GSS1 159 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Raet1bO08603 253 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 PspnO70300 156 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 P01740 135 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cryba1P02525 198 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Wt1P22561 449 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Hoxc5P32043 222 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Rpl18P35980 188 aaKnown RBP7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zfp935Q14DI0 353 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 DmknQ6P253 517 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr138Q7TRI7 312 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Sec61bQ9CQS8 96 aaKnown RBP7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Tmem176aQ9DCS1 244 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Slc23a2Q9EPR4 648 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gnpnat1Q9JK38 184 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 CntrlA2AL36 2334 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 6720489N17RikA0A1Y7VJW0 127 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Pglyrp3A1A547 347 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm21775J3KMK6 180 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 CntfrO88507 372 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Tnfrsf1aP25118 454 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Oprk1P33534 380 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Dynlt3P56387 116 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Rbp2Q08652 134 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr1269Q8VEZ2 309 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Pear1Q8VIK5 1034 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Derl1Q99J56 251 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Tceal8Q9CZY2 117 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Acbd7Q9D258 88 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr887Q9EQA6 309 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gpr132Q9Z282 382 aa7.44□□□□□ -1.22
Upf3b-201ENSMUST00000076265 CenpfE9Q3P4 2997 aaKnown RBP7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 1700084M14RikB1AT01 78 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zcchc24B2RVL6 241 aaKnown RBP7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr918E9PVZ7 325 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr420E9Q4G0 321 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 C530025M09RikF6RGA8 229 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Nmur1O55040 428 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 P06328 117 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cr2P19070 1025 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Bcl2a1cQ0P538 128 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zfp941Q3URY5 674 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm904Q3V2L5 102 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 C1ql4Q4ZJM9 238 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm5416Q6IE28 97 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 TMEM229BQ8BFQ2 167 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zfp57Q8C6P8 421 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 FuomQ8R2K1 153 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cox18Q8VC74 331 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr129Q8VEY1 330 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr46Q8VGJ4 318 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr1019Q8VGS3 310 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr569Q8VGZ2 314 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Asf1aQ9CQE6 204 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Urm1Q9D2P4 101 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Wdfy3Q6VNB8 3508 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Smim10l1A0A087WNQ7 89 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ube2ql1A0PJN4 161 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zfp334A2A4U6 679 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr914E9PW59 316 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cyp2d37-psF6YKB5 150 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Dcpp1L7N1X9 171 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Loxl2P58022 776 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Slc25a31Q3V132 320 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Slc17a1Q61983 465 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Znf641Q8BZ34 422 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Dcun1d4Q8CCA0 292 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Fam20bQ8VCS3 409 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr641Q8VGX6 312 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Pradc1Q9D9N8 188 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mcts1Q9DB27 181 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Popdc3Q9ES81 291 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Neu2Q9JMH3 379 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Bub3Q9WVA3 326 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cx3cr1Q9Z0D9 354 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Syngr4Q9Z1L2 233 aa7.43□□□□□ -1.22
Upf3b-201ENSMUST00000076265 A6H6Q4 206 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Amy2P00688 508 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Csf3P09920 208 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 PlaurP35456 327 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Sox3P53784 375 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ca10P61215 328 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ppp1r32Q148A4 427 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ssty2Q149W4 227 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm21292Q78EE2 227 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Slc35f2Q7TML3 375 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mlf2Q99KX1 247 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Tmem189Q99LQ7 271 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mrpl53Q9D1H8 118 aaKnown RBP7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Fbp1Q9QXD6 338 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Fhl5Q9WTX7 284 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Upk1bQ9Z2C6 260 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr122W4VSP0 330 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms