RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
PHGDH-224ENST00000641711 MYOD1P15172 320 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 COX7A1P24310 79 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 GPX4P36969 197 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-224ENST00000641711 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
PHGDH-224ENST00000641711 REG1BP48304 166 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 CDC34P49427 236 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-224ENST00000641711 PSMB3P49720 205 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 PNRC1Q12796 327 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-224ENST00000641711 RAB31Q13636 194 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 DIAPH2-AS1Q14236 149 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 VMA21Q3ZAQ7 101 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 RNF212Q495C1 297 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 TEPPQ6URK8 271 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 TMEM144Q7Z5S9 345 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 TEX45Q8NA69 505 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 OR4P4Q8NGL7 312 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 OR5R1Q8NH85 324 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 CACNG8Q8WXS5 425 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 NIPSNAP3BQ9BS92 247 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 COMMD5Q9GZQ3 224 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 DPM3Q9P2X0 92 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 PUS1Q9Y606 427 aaKnown RBP eCLIP8.19□□□□□ -1.1
PHGDH-224ENST00000641711 PXMP4Q9Y6I8 212 aa8.19□□□□□ -1.1
PHGDH-224ENST00000641711 ANK3Q12955 4377 aaKnown RBP8.18□□□□□ -1.1
PHGDH-224ENST00000641711 B4DEV8 164 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 BUB1B-PAK6H3BSN5 160 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 CRYGBP07316 175 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 CD81P60033 236 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 ERHP84090 104 aaKnown RBP8.18□□□□□ -1.1
PHGDH-224ENST00000641711 MEF2BQ02080 365 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-224ENST00000641711 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 RUSC1-AS1Q66K80 236 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 Q6YL49 198 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 RNF5Q99942 180 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
PHGDH-224ENST00000641711 IGHV3OR16-10A0A075B7F0 116 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 A0A0U1RQK1 487 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 CXorf65A6NEN9 183 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 AKR1C3P42330 323 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PRR20EP86478 221 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PRR20CP86479 221 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PRR20DP86480 221 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PRR20BP86481 221 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PRR20AP86496 221 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 CD69Q07108 199 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 HNF4GQ14541 408 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 MRGPRG-AS1Q2M3A8 158 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 DEFB112Q30KQ8 113 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 MIC13Q5XKP0 118 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 RNASEH2CQ8TDP1 164 aaKnown RBP8.17□□□□□ -1.1
PHGDH-224ENST00000641711 HIST1H2BAQ96A08 127 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 TXNDC17Q9BRA2 123 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 C20orf24Q9BUV8 137 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 PITPNC1Q9UKF7 332 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 SLC45A2Q9UMX9 530 aa8.17□□□□□ -1.1
PHGDH-224ENST00000641711 IGHV1-3A0A0C4DH29 117 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 A0A1W2PPV4 95 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 CGB1A6NKQ9 187 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 CRYBA1P05813 215 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 LINC00869P0C866 280 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 TNCP24821 2201 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 BRS3P32247 399 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 SUB1P53999 127 aaKnown RBP eCLIP8.16□□□□□ -1.1
PHGDH-224ENST00000641711 DLX1P56177 255 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 B2MP61769 119 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 AKIRIN2Q53H80 203 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 TPTE2P1Q5T6R2 138 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 MRPL41Q8IXM3 137 aaKnown RBP8.16□□□□□ -1.1
PHGDH-224ENST00000641711 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 BCL6BQ8N143 479 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-224ENST00000641711 STPG3Q8N7X2 389 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 SIGLECL1Q8N7X8 197 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 RPEQ96AT9 228 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 ZNF48Q96MX3 618 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-224ENST00000641711 C19orf24Q9BVV8 132 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 TMPRSS5Q9H3S3 457 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-224ENST00000641711 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 TMEM242Q9NWH2 141 aa8.16□□□□□ -1.1
PHGDH-224ENST00000641711 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 DNAJC9-AS1A6NH13 148 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 E7EUB6 86 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 HMGB3O15347 200 aaKnown RBP8.15□□□□□ -1.1
PHGDH-224ENST00000641711 SLC25A17O43808 307 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 EIF3GO75821 320 aaKnown RBP eCLIP8.15□□□□□ -1.1
PHGDH-224ENST00000641711 OR2C1O95371 312 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 CXorf1O96002 111 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 OPN1MWP04001 364 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 RNASE1P07998 156 aaKnown RBP8.15□□□□□ -1.1
PHGDH-224ENST00000641711 OPN1MW2P0DN77 364 aa8.15□□□□□ -1.1
PHGDH-224ENST00000641711 OPN1MW3P0DN78 364 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms