RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MGST2Q99735 147 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 WNT10AQ9GZT5 417 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 FNDC4Q9H6D8 234 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-221ENST00000641573 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 PFDN2Q9UHV9 154 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
PHGDH-221ENST00000641573 NPIPB5A8MRT5 1133 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 TEX46H3BTG2 121 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 CORTO00230 105 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 CRYGCP07315 174 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 EGR2P11161 476 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-221ENST00000641573 ELLP55199 621 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-221ENST00000641573 ACSM6Q6P461 480 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 TMEM144Q7Z5S9 345 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 TEX29Q8N6K0 151 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 OR2T6Q8NHC8 308 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 PITPNC1Q9UKF7 332 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 DMRT1Q9Y5R6 373 aa10.33□□□□□ -0.76
PHGDH-221ENST00000641573 AMY1AP04745 511 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 DEFA4P12838 97 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 ZNF616Q08AN1 781 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 RAB31Q13636 194 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 TMEM41BQ5BJD5 291 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 FFAR4Q5NUL3 377 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 ETFRF1Q6IPR1 90 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 TTC9CQ8N5M4 171 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-221ENST00000641573 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 LFNGQ8NES3 379 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 OR1L6Q8NGR2 347 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 ACY3Q96HD9 319 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 GGTLC1Q9BX51 225 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 RPRMQ9NS64 109 aa10.32□□□□□ -0.76
PHGDH-221ENST00000641573 M0QZK8 103 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 AGPAT2O15120 278 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 TSPAN9O75954 239 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 MT-CO2P00403 227 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 IGHV3-48P01763 117 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 IGHV4-59P01825 116 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 MBP02144 154 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 IER3P46695 156 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 RAB2AP61019 212 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 MIC13Q5XKP0 118 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 C16orf82Q7Z2V1 217 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 OR5T1Q8NG75 326 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 ZNF48Q96MX3 618 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-221ENST00000641573 CITED4Q96RK1 184 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 KCNIP2Q9NS61 270 aa10.31□□□□□ -0.76
PHGDH-221ENST00000641573 IGHV3-21A0A0B4J1V1 117 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 MFSD2BA6NFX1 497 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 I3L2K1 104 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 SOX15O60248 233 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 OR10J1P30954 320 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 SRP14P37108 136 aaKnown RBP10.3□□□□□ -0.76
PHGDH-221ENST00000641573 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 ACOT6Q3I5F7 207 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-221ENST00000641573 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 UNQ5815/PRO19632Q6UWF5 114 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 Q6YL49 198 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 OR5R1Q8NH85 324 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 NPIPB3Q92617 1050 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 MARC2Q969Z3 335 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
PHGDH-221ENST00000641573 SLC45A2Q9UMX9 530 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 PXMP4Q9Y6I8 212 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 PKD1L1Q8TDX9 2849 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
PHGDH-221ENST00000641573 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 IGKV1OR2-108A0A075B7D4 117 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 BTBD17A6NE02 478 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 NUDT19A8MXV4 375 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 CYB5BO43169 146 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 TSPAN15O95858 294 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 H2AFB1P0C5Y9 115 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 RPL29P47914 159 aaKnown RBP10.29□□□□□ -0.76
PHGDH-221ENST00000641573 RND2P52198 227 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 IL34Q6ZMJ4 242 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 THAP8Q8NA92 274 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 OR10G4Q8NGN3 311 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 OR10G9Q8NGN4 311 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 OR10G7Q8NGN6 311 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 LYPD6BQ8NI32 183 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-221ENST00000641573 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 FANCD2OSQ96PS1 177 aa10.29□□□□□ -0.76
PHGDH-221ENST00000641573 K7EIM0 57 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 YIF1AO95070 293 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 M6PRP20645 277 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 B2MP61769 119 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 ZNF726P1Q15940 193 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 FAM122CQ6P4D5 195 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 CYP2G1PQ6ZSU1 146 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 STPG3Q8N7X2 389 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms