RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 IGHV3-48P01763 117 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 ARL14EPLP0DKL9 152 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 SLC25A16P16260 332 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 CD81P60033 236 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 SELENOTP62341 195 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 C20orf24Q9BUV8 137 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 RPS10P5Q9NQ39 176 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 VPS13CQ709C8 3753 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 TCRBV4S1A1TA0A5B7 111 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 PAGE4O60829 102 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 RHEBQ15382 184 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 CLEC12BQ2HXU8 276 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 FBLN7Q53RD9 439 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 TMEM116Q8NCL8 245 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 FUT9Q9Y231 359 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 C7orf77A4D0Y5 90 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 MSMBP08118 114 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 CTRB1P17538 263 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 CX3CL1P78423 397 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 FAM90A2PQ658T7 463 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 CTRB2Q6GPI1 263 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 C19orf35Q6ZS72 473 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 GATAD1Q8WUU5 269 aa13.73□□□□□ -0.21
PHGDH-208ENST00000641023 OR4F5Q8NH21 305 aa13.72□□□□□ -0.21
PHGDH-208ENST00000641023 ARPC1AQ92747 370 aa13.72□□□□□ -0.21
PHGDH-208ENST00000641023 TVP23CQ96ET8 276 aa13.72□□□□□ -0.21
PHGDH-208ENST00000641023 OR4F4Q96R69 305 aa13.72□□□□□ -0.21
PHGDH-208ENST00000641023 FAM103A1Q9BTL3 118 aaKnown RBP13.72□□□□□ -0.21
PHGDH-208ENST00000641023 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
PHGDH-208ENST00000641023 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 B4DSR2 109 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 SPATA31B1PQ5VZV4 182 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 CRYBG3Q68DQ2 2970 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 RNF2Q99496 336 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 TNFRSF19Q9NS68 423 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 IGKV1D-37A0A075B6S9 117 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 C11orf94C9JXX5 98 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 OR5G3P0C626 314 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 TAS2R45P59539 299 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 ZNF90Q03938 601 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 FAM120AOSQ5T036 256 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 PFDN5Q99471 154 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 SMCO4Q9NRQ5 59 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 TECRQ9NZ01 308 aaKnown RBP13.71□□□□□ -0.21
PHGDH-208ENST00000641023 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
PHGDH-208ENST00000641023 MIR17HGQ75NE6 70 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 OR1L4Q8NGR5 311 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 TMEM37Q8WXS4 190 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 MRPL32Q9BYC8 188 aaKnown RBP13.7□□□□□ -0.22
PHGDH-208ENST00000641023 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 TRAV40A0A0B4J280 105 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 CLN5O75503 358 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 GCHFRP30047 84 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 BPIFB3P59826 476 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 PNRC1Q12796 327 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-208ENST00000641023 CST9LP1Q5W188 147 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 Q8N9W7 124 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 TRGV9Q99603 122 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 RASL11BQ9BPW5 248 aa13.7□□□□□ -0.22
PHGDH-208ENST00000641023 IGHV3-21A0A0B4J1V1 117 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 ZNF727A8MUV8 499 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 I3L2K1 104 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 PDE6DO43924 150 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 UBE2G2P60604 165 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 PQLC2Q6ZP29 291 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
PHGDH-208ENST00000641023 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 HLA-DRB1P01911 266 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 GATA3P23771 443 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 COL8A1P27658 744 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 AKR1C3P42330 323 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 IGHV3OR16-10A0A075B7F0 116 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 C8orf88P0DMB2 117 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 RUSC1-AS1Q66K80 236 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 TTC9CQ8N5M4 171 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 TMEM167BQ9NRX6 74 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 HIF1ANQ9NWT6 349 aa13.68□□□□□ -0.22
PHGDH-208ENST00000641023 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-208ENST00000641023 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 TRAV20A0A0B4J274 112 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 BRD3OSQ6XYD6 125 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 TUBA4BQ9H853 241 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 OR7C2O60412 319 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 NDPQ00604 133 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
PHGDH-208ENST00000641023 RPUSD4Q96CM3 377 aaKnown RBP13.67□□□□□ -0.22
PHGDH-208ENST00000641023 B4DEV8 164 aa13.66□□□□□ -0.22
PHGDH-208ENST00000641023 F6UZH7 168 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms