RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ELOVL1Q9BW60 279 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 CLEC7AQ9BXN2 247 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 ARL2-SNX15V9GYD0 113 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 OVOL3O00110 214 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 OR5G3P0C626 314 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 SRP14P37108 136 aaKnown RBP12.11□□□□□ -0.47
TRIM3-215ENST00000639856 ARF6P62330 175 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 OR2T6Q8NHC8 308 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 TECRQ9NZ01 308 aaKnown RBP12.11□□□□□ -0.47
TRIM3-215ENST00000639856 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 BUB1B-PAK6H3BSN5 160 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 PSG5Q15238 335 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 PQLC2Q6ZP29 291 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 TEX45Q8NA69 505 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 ZNF114Q8NC26 417 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 ACY3Q96HD9 319 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 FNDC4Q9H6D8 234 aaPredicted RBP12.11□□□□□ -0.47
TRIM3-215ENST00000639856 TMEM167BQ9NRX6 74 aa12.11□□□□□ -0.47
TRIM3-215ENST00000639856 AURKAIP1Q9NWT8 199 aaPredicted RBP12.11□□□□□ -0.47
TRIM3-215ENST00000639856 NAV3Q8IVL0 2385 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 AREGP15514 252 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 ZFP36P26651 326 aaKnown RBP12.1□□□□□ -0.47
TRIM3-215ENST00000639856 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 INSIG2Q9Y5U4 225 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 A0A1W2PPQ1 181 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 PPP1R2P9O14990 202 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 GGCTO75223 188 aaKnown RBP12.1□□□□□ -0.47
TRIM3-215ENST00000639856 IGHV4-39P01824 125 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 TAS2R45P59539 299 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM3-215ENST00000639856 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 ZNF503Q96F45 646 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
TRIM3-215ENST00000639856 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
TRIM3-215ENST00000639856 KCNIP4Q6PIL6 250 aa12.09□□□□□ -0.47
TRIM3-215ENST00000639856 IGFBPL1Q8WX77 278 aa12.09□□□□□ -0.47
TRIM3-215ENST00000639856 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
TRIM3-215ENST00000639856 PSMB11A5LHX3 300 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 IFITM10A6NMD0 228 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 OR7C2O60412 319 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 CRYGBP07316 175 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 KLRD1Q13241 179 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 PRSS8Q16651 343 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 CLEC12BQ2HXU8 276 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 LDLRAD2Q5SZI1 272 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 OR4X1Q8NH49 305 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 SFRP2Q96HF1 295 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 SLC25A33Q9BSK2 321 aa12.08□□□□□ -0.47
TRIM3-215ENST00000639856 MRPL32Q9BYC8 188 aaKnown RBP12.08□□□□□ -0.47
TRIM3-215ENST00000639856 ELOA3CA0A087WX78 387 aaPredicted RBP12.08□□□□□ -0.48
TRIM3-215ENST00000639856 IGLC7A0M8Q6 106 aa12.08□□□□□ -0.48
TRIM3-215ENST00000639856 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
TRIM3-215ENST00000639856 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
TRIM3-215ENST00000639856 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
TRIM3-215ENST00000639856 OCC1Q8TAD7 63 aa12.08□□□□□ -0.48
TRIM3-215ENST00000639856 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
TRIM3-215ENST00000639856 IMMP2LQ96T52 175 aa12.08□□□□□ -0.48
TRIM3-215ENST00000639856 RNF2Q99496 336 aa12.08□□□□□ -0.48
TRIM3-215ENST00000639856 AMMECR1Q9Y4X0 333 aaPredicted RBP12.08□□□□□ -0.48
TRIM3-215ENST00000639856 MDFIC2A0A1B0GVS7 189 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 TYMSP04818 313 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 REG1AP05451 166 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 CNTFRP26992 372 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 RPL27AP46776 148 aaKnown RBP12.07□□□□□ -0.48
TRIM3-215ENST00000639856 LCN2P80188 198 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 SSBP2P81877 361 aaPredicted RBP12.07□□□□□ -0.48
TRIM3-215ENST00000639856 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 CCL19Q99731 98 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 GAR1Q9NY12 217 aaKnown RBP12.07□□□□□ -0.48
TRIM3-215ENST00000639856 SIGLEC9Q9Y336 463 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 TCRBV4S1A1TA0A5B7 111 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 C9JCJ5 164 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 TNXAQ16473 311 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 PVRIGQ6DKI7 326 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 LURAP1LQ8IV03 231 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 LINC00469Q8N7U9 141 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 RPEQ96AT9 228 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 CENPEQ02224 2701 aa12.07□□□□□ -0.48
TRIM3-215ENST00000639856 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 ABCA2Q9BZC7 2435 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 SELENOTP62341 195 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 FOXL1Q12952 345 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 HCP5Q6MZN7 132 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 SPOCK3Q9BQ16 436 aa12.06□□□□□ -0.48
TRIM3-215ENST00000639856 MRPL36Q9P0J6 103 aaKnown RBP12.06□□□□□ -0.48
TRIM3-215ENST00000639856 MAP1AP78559 2803 aaPredicted RBP12.06□□□□□ -0.48
TRIM3-215ENST00000639856 A0A1W2PRD5 423 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 A0A1W2PRF3 423 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms