RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 HSPE1P61604 102 aaKnown RBP10.82□□□□□ -0.68
SYNE2-228ENST00000639659 TSPAN5P62079 268 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 DHRS2Q13268 280 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 PSMG4Q5JS54 123 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 ZNF575Q86XF7 245 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 FCGR1BQ92637 280 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 TMEM230Q96A57 120 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 SEC22AQ96IW7 307 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
SYNE2-228ENST00000639659 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 TMEM50AO95807 157 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 IGKV1-39P01597 117 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 IGKV1D-39P04432 117 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 HOXA1P49639 335 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-228ENST00000639659 EMP1P54849 157 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 TAS2R20P59543 309 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 TMEM69Q5SWH9 247 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 S100A16Q96FQ6 103 aaKnown RBP10.81□□□□□ -0.68
SYNE2-228ENST00000639659 XCL2Q9UBD3 114 aa10.81□□□□□ -0.68
SYNE2-228ENST00000639659 IFNA21P01568 189 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 IFNA17P01571 189 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 NPY1RP25929 384 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 OPRK1P41145 380 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 CADM3Q8N126 398 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 GRAMD2BQ96HH9 432 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 PDCD10Q9BUL8 212 aa10.8□□□□□ -0.68
SYNE2-228ENST00000639659 HELTA6NFD8 242 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 SCGB2A1O75556 95 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 EIF2B2P49770 351 aaKnown RBP10.79□□□□□ -0.68
SYNE2-228ENST00000639659 AKR1C2P52895 323 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 UBE2NLQ5JXB2 153 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 RAB40CQ96S21 281 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 KRTAP4-5Q9BYR2 181 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 ENY2Q9NPA8 101 aa10.79□□□□□ -0.68
SYNE2-228ENST00000639659 MRPL36Q9P0J6 103 aaKnown RBP10.79□□□□□ -0.68
SYNE2-228ENST00000639659 DNAH11Q96DT5 4516 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 IGHV3OR16-12A0A075B7B8 117 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 HTN3P15516 51 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 PRSS3P35030 304 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 SUB1P53999 127 aaKnown RBP eCLIP10.78□□□□□ -0.68
SYNE2-228ENST00000639659 TIGITQ495A1 244 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 LPCAT3Q6P1A2 487 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 SAMD12Q8N8I0 201 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 CSNK1G2-AS1Q8NCQ2 148 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
SYNE2-228ENST00000639659 CORTO00230 105 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 CLN5O75503 358 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 PGAM2P15259 253 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 CRYBB3P26998 211 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 TGFBR1P36897 503 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 ETV6P41212 452 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 FXYD7P58549 80 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.69
SYNE2-228ENST00000639659 NEDD8Q15843 81 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 MLANAQ16655 118 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 LGALS9BQ3B8N2 356 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 RNASE11Q8TAA1 199 aaKnown RBP10.77□□□□□ -0.69
SYNE2-228ENST00000639659 C1QTNF4Q9BXJ3 329 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 PLA2G2EQ9NZK7 142 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 RAB26Q9ULW5 256 aa10.77□□□□□ -0.69
SYNE2-228ENST00000639659 IGKV3-20P01619 116 aa10.76□□□□□ -0.69
SYNE2-228ENST00000639659 RNASE2P10153 161 aaKnown RBP10.76□□□□□ -0.69
SYNE2-228ENST00000639659 SOHLH1Q5JUK2 328 aa10.76□□□□□ -0.69
SYNE2-228ENST00000639659 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-228ENST00000639659 FAM212BQ9NTI7 297 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-228ENST00000639659 IGKV1-5P01602 117 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 NAT1P18440 290 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 PI3P19957 117 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 SNRPD3P62318 126 aaKnown RBP10.75□□□□□ -0.69
SYNE2-228ENST00000639659 KCTD21Q4G0X4 260 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 RNASE12Q5GAN4 147 aaKnown RBP10.75□□□□□ -0.69
SYNE2-228ENST00000639659 SNX29P2Q8IUI4 249 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 LYSMD2Q8IV50 215 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 PKD1P98161 4303 aa10.75□□□□□ -0.69
SYNE2-228ENST00000639659 M0QYG6 137 aa10.74□□□□□ -0.69
SYNE2-228ENST00000639659 HNRNPCP07910 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
SYNE2-228ENST00000639659 SPART-AS1P0CW21 52 aa10.74□□□□□ -0.69
SYNE2-228ENST00000639659 TRIM16LQ309B1 348 aa10.74□□□□□ -0.69
SYNE2-228ENST00000639659 Q6ZRM9 215 aa10.74□□□□□ -0.69
SYNE2-228ENST00000639659 OR4X1Q8NH49 305 aa10.74□□□□□ -0.69
SYNE2-228ENST00000639659 A0A0B4J293 547 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 FAM90A26D6RGX4 464 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 RND2P52198 227 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 LSM3P62310 102 aaKnown RBP10.73□□□□□ -0.69
SYNE2-228ENST00000639659 C16orf54Q6UWD8 224 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 Q8WTZ3 238 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 GLMPQ8WWB7 406 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 TP53RKQ96S44 253 aa10.73□□□□□ -0.69
SYNE2-228ENST00000639659 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 H3BMM0 161 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 IL4P05112 153 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 AP2S1P53680 142 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-228ENST00000639659 PIGPP57054 158 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 DEFB1P60022 68 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 CROCCP3Q8IVE0 287 aa10.72□□□□□ -0.69
SYNE2-228ENST00000639659 TRAV30A0A087WSZ9 112 aa10.71□□□□□ -0.69
SYNE2-228ENST00000639659 C16orf90A8MZG2 172 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms