RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 NPY1RP25929 384 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 HTR2BP41595 481 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 SUB1P53999 127 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLN6-225ENST00000638144 GUCA2BQ16661 112 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 PVRIGQ6DKI7 326 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 SPSB3Q6PJ21 355 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 LYG2Q86SG7 212 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 TMEM61Q8N0U2 210 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 LRTM2Q8N967 370 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 DTD1Q8TEA8 209 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 S100ZQ8WXG8 99 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 MAGT1Q9H0U3 335 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 SIGLEC8Q9NYZ4 499 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 SMAD5-AS1Q9Y6J3 95 aa9.45□□□□□ -0.9
CLN6-225ENST00000638144 DUXBA0A1W2PPF3 345 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 NDUFA4O00483 81 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 PITX3O75364 302 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 SCAF4O95104 1147 aaKnown RBP9.44□□□□□ -0.9
CLN6-225ENST00000638144 IFNA10P01566 189 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 Q8N1Y9 231 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 DUSP18Q8NEJ0 188 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 B9D2Q9BPU9 175 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 HIPK2Q9H2X6 1198 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 PALMDQ9NP74 551 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 NUDT15Q9NV35 164 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 UFC1Q9Y3C8 167 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 NBEAL2Q6ZNJ1 2754 aa9.44□□□□□ -0.9
CLN6-225ENST00000638144 ZNF785A8K8V0 405 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 CORTO00230 105 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 TCRBP04435 133 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 FRMD6-AS1P0C7T7 363 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 NPBWR1P48145 328 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 RND2P52198 227 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 IFITM3Q01628 133 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 TIGITQ495A1 244 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 C2orf83Q53S99 150 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 TXN2Q99757 166 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 SEC22CQ9BRL7 303 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 WDR12Q9GZL7 423 aaKnown RBP9.43□□□□□ -0.9
CLN6-225ENST00000638144 DAZ1Q9NQZ3 744 aaKnown RBP9.43□□□□□ -0.9
CLN6-225ENST00000638144 BATF3Q9NR55 127 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
CLN6-225ENST00000638144 TMED3Q9Y3Q3 217 aa9.43□□□□□ -0.9
CLN6-225ENST00000638144 CCSO14618 274 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 TMEM50AO95807 157 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 CD7P09564 240 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 FCGR2BP31994 310 aaPredicted RBP9.42□□□□□ -0.9
CLN6-225ENST00000638144 CD81P60033 236 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 RELQ04864 619 aaPredicted RBP9.42□□□□□ -0.9
CLN6-225ENST00000638144 DCTN2Q13561 401 aaKnown RBP9.42□□□□□ -0.9
CLN6-225ENST00000638144 ZNF846Q147U1 533 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 COQ8AQ8NI60 647 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 ACY3Q96HD9 319 aa9.42□□□□□ -0.9
CLN6-225ENST00000638144 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
CLN6-225ENST00000638144 TECRQ9NZ01 308 aaKnown RBP9.42□□□□□ -0.9
CLN6-225ENST00000638144 PUS1Q9Y606 427 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLN6-225ENST00000638144 IGHV3-66A0A0C4DH42 116 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 FAM240BA0A1B0GVZ2 78 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 H3BP45 60 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 WRBO00258 174 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 CLN5O75503 358 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 UPK1BO75841 260 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 C8orf88P0DMB2 117 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
CLN6-225ENST00000638144 ASAH1Q13510 395 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 TOMM20LQ6UXN7 152 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 SLC16A13Q7RTY0 426 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 OR2K2Q8NGT1 345 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 OR4X1Q8NH49 305 aa9.41□□□□□ -0.9
CLN6-225ENST00000638144 MRPL27Q9P0M9 148 aaKnown RBP9.41□□□□□ -0.9
CLN6-225ENST00000638144 PIGBOS1A0A0B4J2F0 54 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 C15orf62A8K5M9 175 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 SCGB1D2O95969 90 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 IGKV1-17P01599 117 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 APOHP02749 345 aaPredicted RBP9.4□□□□□ -0.9
CLN6-225ENST00000638144 IFNA4P05014 189 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 H2AFB2P0C5Z0 115 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 SLC25A6P12236 298 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 MZT2BQ6NZ67 158 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 ZNF600Q6ZNG1 722 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 SBSPONQ8IVN8 264 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
CLN6-225ENST00000638144 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 MARC2Q969Z3 335 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 OR10C1Q96KK4 312 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 NEURL2Q9BR09 285 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 ZFAND3Q9H8U3 227 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 U3KQ87 197 aa9.4□□□□□ -0.9
CLN6-225ENST00000638144 IGKV3-7A0A075B6H7 116 aa9.39□□□□□ -0.91
CLN6-225ENST00000638144 IGHV7-4-1A0A0J9YVY3 117 aa9.39□□□□□ -0.91
CLN6-225ENST00000638144 FAM90A26D6RGX4 464 aa9.39□□□□□ -0.91
CLN6-225ENST00000638144 SYNGR2O43760 224 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms