RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SPINK9Q5DT21 86 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 Q6ZWC4 215 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 VKORC1L1Q8N0U8 176 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 OR4P4Q8NGL7 312 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 HRNRQ86YZ3 2850 aaPredicted RBP9.42□□□□□ -0.9
CLN6-217ENST00000636964 CEBPZOSA8MTT3 80 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 COL8A2P25067 703 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 CDKN1AP38936 164 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 PAX2Q02962 417 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 UNQ5815/PRO19632Q6UWF5 114 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 SYNGR2O43760 224 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 RPL15P61313 204 aaKnown RBP9.41□□□□□ -0.9
CLN6-217ENST00000636964 ARL16Q0P5N6 197 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 ZNF672Q499Z4 452 aaPredicted RBP9.41□□□□□ -0.9
CLN6-217ENST00000636964 HSD17B10Q99714 261 aaKnown RBP9.41□□□□□ -0.9
CLN6-217ENST00000636964 ATP5SQ99766 215 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 K7EQM0 130 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 RAB29O14966 203 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 GNLYP22749 145 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 OR10J1P30954 320 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
CLN6-217ENST00000636964 CYP2G1PQ6ZSU1 146 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 GATAD1Q8WUU5 269 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 IDI2-AS1Q9NZ38 188 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 FAM208BQ5VWN6 2430 aa9.41□□□□□ -0.9
CLN6-217ENST00000636964 hADV38S2A0JD32 116 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 SLC25A6P12236 298 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 CNN1P51911 297 aaKnown RBP9.4□□□□□ -0.9
CLN6-217ENST00000636964 TFF3Q07654 80 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 BAXQ07812 192 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 EFNB3Q15768 340 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 COX19Q49B96 90 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 DPPA3Q6W0C5 159 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 SMIM7Q9BQ49 75 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 HRASP01112 189 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 IGKV1D-33P01593 117 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 IGKV1-33P01594 117 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.9
CLN6-217ENST00000636964 RPS16P62249 146 aaKnown RBP9.4□□□□□ -0.9
CLN6-217ENST00000636964 SPANXN5Q5MJ07 72 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 TMEM200BQ69YZ2 307 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 ZNF562Q6V9R5 426 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 H2BFWTQ7Z2G1 175 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 NIT1Q86X76 327 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 PSENENQ9NZ42 101 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 NAT8Q9UHE5 227 aa9.4□□□□□ -0.9
CLN6-217ENST00000636964 NDUFB3O43676 98 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 GLMPQ8WWB7 406 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 TYMSP04818 313 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 LOXP28300 417 aaPredicted RBP9.39□□□□□ -0.91
CLN6-217ENST00000636964 HAPLN4Q86UW8 402 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 MS4A10Q96PG2 267 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 PAM16Q9Y3D7 125 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 HCFC1P51610 2035 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 PIGBOS1A0A0B4J2F0 54 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 IL3RAP26951 378 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 PRB3Q04118 309 aaPredicted RBP9.39□□□□□ -0.91
CLN6-217ENST00000636964 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 RAB40CQ96S21 281 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 P2RX4Q99571 388 aa9.39□□□□□ -0.91
CLN6-217ENST00000636964 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 H7BYZ3 331 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 KBTBD11O94819 623 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 LRRC10Q5BKY1 277 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 TOMM20LQ6UXN7 152 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 PEF1Q9UBV8 284 aaKnown RBP9.38□□□□□ -0.91
CLN6-217ENST00000636964 LINC00312Q9Y6C7 94 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 CFAP46Q8IYW2 2715 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 TNFRSF13BO14836 293 aaPredicted RBP9.38□□□□□ -0.91
CLN6-217ENST00000636964 RBFOX2O43251 390 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLN6-217ENST00000636964 OR9G9P0C7N8 305 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 DLX1P56177 255 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 MSMO1Q15800 293 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 CST9LP1Q5W188 147 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 S1PR3Q99500 378 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 PARLQ9H300 379 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.38□□□□□ -0.91
CLN6-217ENST00000636964 RPUSD1Q9UJJ7 312 aaKnown RBP9.38□□□□□ -0.91
CLN6-217ENST00000636964 GRIFINA4D1Z8 144 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 HMGB3O15347 200 aaKnown RBP9.38□□□□□ -0.91
CLN6-217ENST00000636964 P0C879 139 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
CLN6-217ENST00000636964 OR2T10Q8NGZ9 312 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
CLN6-217ENST00000636964 MALRD1Q5VYJ5 2156 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 IGSF10Q6WRI0 2623 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 NPPCP23582 126 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 ERASQ7Z444 233 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms