RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 SCARB1Q8WTV0 552 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 TAF15Q92804 592 aaKnown RBP eCLIP7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 SLC35E1Q96K37 410 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 GINS3Q9BRX5 216 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 C16orf95Q9H693 158 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 NPVFQ9HCQ7 196 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 ZNF355PQ9NSJ1 428 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 MRPL36Q9P0J6 103 aaKnown RBP7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 FBXL7Q9UJT9 491 aa7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 LSM4Q9Y4Z0 139 aaKnown RBP7.48□□□□□ -1.21
CACNA1A-223ENST00000636058 IGKV1OR2-108A0A075B7D4 117 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 IGHV3-21A0A0B4J1V1 117 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 SMCO3A2RU48 225 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 TMEM89A2RUT3 159 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 PSMB11A5LHX3 300 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 MFSD2BA6NFX1 497 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 FAM223BA6NKX1 122 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 RGS13O14921 159 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 MPDU1O75352 247 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 NDUFA7O95182 113 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 IGHV3-48P01763 117 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 PSMB8P28062 276 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 SLC35B1P78383 322 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 RHOGP84095 191 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 DEFA5Q01523 94 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 IFITM2Q01629 132 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 AKR1C1Q04828 323 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 C15orf32Q32M92 178 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 TEPPQ6URK8 271 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 BTNL8Q6UX41 500 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 FAM223AQ8IWN6 122 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 HSD17B11Q8NBQ5 300 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 OR4X1Q8NH49 305 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 SCGB1C1Q8TD33 95 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 VN1R17PQ8TDU5 208 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 NPIPB3Q92617 1050 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 MS4A10Q96PG2 267 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 SLA2Q9H6Q3 261 aa7.47□□□□□ -1.21
CACNA1A-223ENST00000636058 IGKV1D-37A0A075B6S9 117 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 CFDP00746 253 aaPredicted RBP7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 TRGV3P03979 118 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 SPP1P10451 314 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 PF4V1P10720 104 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 FGF7P21781 194 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 ATP6V0CP27449 155 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 RND2P52198 227 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 TPPP2P59282 170 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 RUNX1Q01196 453 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 FOXE3Q13461 319 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 TEX38Q6PEX7 206 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 C10orf99Q6UWK7 81 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 CENPVQ7Z7K6 275 aaPredicted RBP7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 ZNF329Q86UD4 541 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 THAP8Q8NA92 274 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 PHYHIPLQ96FC7 376 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 ACY3Q96HD9 319 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 CXorf58Q96LI9 332 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 MGST2Q99735 147 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 RSG1Q9BU20 258 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 NPCDR1Q9BY65 106 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 SH3BGRL3Q9H299 93 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 KLK15Q9H2R5 256 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 C21orf62Q9NYP8 219 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 TIMM9Q9Y5J7 89 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 MAST4O15021 2626 aa7.46□□□□□ -1.22
CACNA1A-223ENST00000636058 CLN5O75503 358 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 ELANEP08246 267 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 SEC11BP0C7V7 166 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 IGLC1P0CG04 106 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 NPBWR1P48145 328 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 RAB9AP51151 201 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 MFAP4P55083 255 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 ATP5G2Q06055 141 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 KLHDC1Q8N7A1 406 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 ZNF680Q8NEM1 530 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 LINC01006Q8NI28 216 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 ZNF502Q8TBZ5 544 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 MYOZ3Q8TDC0 251 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 WIPF2Q8TF74 440 aaPredicted RBP7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 ATP6V0BQ99437 205 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 TXN2Q99757 166 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 PSMG3Q9BT73 122 aaPredicted RBP7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 GGTLC1Q9BX51 225 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 SLC25A32Q9H2D1 315 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 S4R3C0 116 aa7.45□□□□□ -1.22
CACNA1A-223ENST00000636058 TRBV7-1A0A0A6YYK4 115 aa7.44□□□□□ -1.22
CACNA1A-223ENST00000636058 A0A0G2JLM5 398 aa7.44□□□□□ -1.22
CACNA1A-223ENST00000636058 TCRBV4S1A1TA0A5B7 111 aa7.44□□□□□ -1.22
CACNA1A-223ENST00000636058 ZFP92A6NM28 416 aa7.44□□□□□ -1.22
CACNA1A-223ENST00000636058 C17orf112F2Z3M2 114 aa7.44□□□□□ -1.22
CACNA1A-223ENST00000636058 AGPAT2O15120 278 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms