RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 IGHV1-2P23083 117 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 GAGE2EQ4V326 116 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 VKORC1Q9BQB6 163 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 GAGE2DQ9UEU5 116 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 CBLN1P23435 193 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 MDS2Q8NDY4 140 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 TMEM30BQ3MIR4 351 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 OCIAD2Q56VL3 154 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM216BQ8N7L0 139 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 CHCHD5Q9BSY4 110 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 TNCP24821 2201 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 PRSS22Q9GZN4 317 aa13.46□□□□□ -0.25
CACNA1A-221ENST00000636012 VCX2Q9H322 139 aa13.46□□□□□ -0.25
CACNA1A-221ENST00000636012 MED13LQ71F56 2210 aa13.46□□□□□ -0.25
CACNA1A-221ENST00000636012 TRBV5-3A0A0A0MS03 114 aa13.46□□□□□ -0.25
CACNA1A-221ENST00000636012 TRBV5-5A0A0J9YX44 114 aa13.46□□□□□ -0.26
CACNA1A-221ENST00000636012 PAX4O43316 350 aa13.46□□□□□ -0.26
CACNA1A-221ENST00000636012 COX5BP10606 129 aa13.46□□□□□ -0.26
CACNA1A-221ENST00000636012 RNF182Q8N6D2 247 aa13.46□□□□□ -0.26
CACNA1A-221ENST00000636012 LSM4Q9Y4Z0 139 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-221ENST00000636012 TRAV41A0A0B4J266 112 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 IGHV2OR16-5A0A0B4J2B6 119 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 VENTXO95231 258 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 PRTN3P24158 256 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 GZMMP51124 257 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 C8orf82Q6P1X6 216 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 RNASE6Q93091 150 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 ARHGAP21Q5T5U3 1957 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 G6PC2Q9NQR9 355 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 C4orf51C9J302 202 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 RND3P61587 244 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 ZCCHC24Q8N2G6 241 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 ZNF114Q8NC26 417 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 SPSB2Q99619 263 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 IGHMP01871 453 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 APOHP02749 345 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 IL6RP08887 468 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 APCDD1LQ8NCL9 501 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 RBM38Q9H0Z9 239 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 IGHV3-53P01767 116 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 CD33P20138 364 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 FHITP49789 147 aa13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 SSBP4Q9BWG4 385 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-221ENST00000636012 ZNF585BQ52M93 769 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 OR11H4Q8NGC9 324 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 VWC2LB2RUY7 222 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 TMEM187Q14656 261 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 TRAV8-1A0A0A6YYK1 113 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 TFF3Q07654 80 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 LEPP41159 167 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 FREM1Q5H8C1 2179 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 SCO2A0A1W2PP80 73 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 PAX1P15863 534 aa13.44□□□□□ -0.26
CACNA1A-221ENST00000636012 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 RAMP1O60894 148 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 MYOD1P15172 320 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 MRPL52Q86TS9 123 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 GGTLC1Q9BX51 225 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 TBR1Q16650 682 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 GTF3AQ92664 365 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 PMCHL2Q9BQD1 86 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 MS4A6AQ9H2W1 248 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 Q9H3A6 140 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 SLC17A3O00476 420 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 FAM19A2Q8N3H0 131 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 ACACAQ13085 2346 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 TRBV9A0A0B4J1U6 114 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 GPX4P36969 197 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 HIST1H2BAQ96A08 127 aa13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 RBMY1FQ15415 496 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-221ENST00000636012 TRAV40A0A0B4J280 105 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 C17orf100A8MU93 164 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 PEF1Q9UBV8 284 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 CHCHD2Q9Y6H1 151 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 DTX2Q86UW9 622 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 DENND4AQ7Z401 1863 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 NIT1Q86X76 327 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 TMEM86BQ8N661 226 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 C9orf106Q8NAJ2 232 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 OR52E5Q8NH55 327 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 NPCDR1Q9BY65 106 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 NDUFS8O00217 210 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 IFI27L2Q9H2X8 130 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 TNFRSF6BO95407 300 aa13.42□□□□□ -0.26
CACNA1A-221ENST00000636012 TRAV14DV4A0A0A6YYC5 116 aa13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 TRAV25A0A0B4J276 109 aa13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 UMODP07911 640 aa13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 CCL3L1P16619 93 aa13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 SLC25A28Q96A46 364 aa13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 NHP2Q9NX24 153 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-221ENST00000636012 A0A1B0GUT8 65 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms