RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 IGHV3-48P01763 117 aa19.55■□□□□ 0.72
CAPNS1-215ENST00000628018 AKR1C8PQ5T2L2 129 aa19.55■□□□□ 0.72
CAPNS1-215ENST00000628018 SLC35E3Q7Z769 313 aa19.55■□□□□ 0.72
CAPNS1-215ENST00000628018 K7EIM0 57 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 CYB5BO43169 146 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 FHITP49789 147 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 RAB31Q13636 194 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 ACSM6Q6P461 480 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 Q6ZS46 218 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 SLC7A5P1Q8MH63 180 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 TMEM116Q8NCL8 245 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 NPIPB3Q92617 1050 aa19.54■□□□□ 0.72
CAPNS1-215ENST00000628018 LY6G6DO95868 133 aa19.53■□□□□ 0.72
CAPNS1-215ENST00000628018 RND2P52198 227 aa19.53■□□□□ 0.72
CAPNS1-215ENST00000628018 BLOC1S1P78537 153 aa19.53■□□□□ 0.72
CAPNS1-215ENST00000628018 Q6ZRG5 221 aa19.53■□□□□ 0.72
CAPNS1-215ENST00000628018 THAP8Q8NA92 274 aa19.53■□□□□ 0.72
CAPNS1-215ENST00000628018 VSIRQ9H7M9 311 aa19.53■□□□□ 0.72
CAPNS1-215ENST00000628018 IGHV3-21A0A0B4J1V1 117 aa19.52■□□□□ 0.72
CAPNS1-215ENST00000628018 TRAV41A0A0B4J266 112 aa19.52■□□□□ 0.72
CAPNS1-215ENST00000628018 SOX15O60248 233 aa19.52■□□□□ 0.72
CAPNS1-215ENST00000628018 DPPA3Q6W0C5 159 aa19.52■□□□□ 0.72
CAPNS1-215ENST00000628018 TMEM86BQ8N661 226 aa19.52■□□□□ 0.72
CAPNS1-215ENST00000628018 RPRMQ9NS64 109 aa19.52■□□□□ 0.72
CAPNS1-215ENST00000628018 RPL29P47914 159 aaKnown RBP19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 ELLP55199 621 aaPredicted RBP19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 FFAR4Q5NUL3 377 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 PXDC1Q5TGL8 231 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 FAM213BQ8TBF2 198 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 THYN1Q9P016 225 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 SLC45A2Q9UMX9 530 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 PXMP4Q9Y6I8 212 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 IGKV1D-37A0A075B6S9 117 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 HIST1H1BP16401 226 aaKnown RBP19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 OR10J1P30954 320 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 TMEM41BQ5BJD5 291 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 MIC13Q5XKP0 118 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 KCNIP2Q9NS61 270 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 MED9Q9NWA0 146 aa19.51■□□□□ 0.71
CAPNS1-215ENST00000628018 MBP02144 154 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 PRR20EP86478 221 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 PRR20CP86479 221 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 PRR20DP86480 221 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 PRR20BP86481 221 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 PRR20AP86496 221 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 OR4X1Q8NH49 305 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 LINC00527Q9UJ94 153 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 ZNF580Q9UK33 172 aa19.5■□□□□ 0.71
CAPNS1-215ENST00000628018 AP4M1O00189 453 aa19.49■□□□□ 0.71
CAPNS1-215ENST00000628018 FOSL1P15407 271 aa19.49■□□□□ 0.71
CAPNS1-215ENST00000628018 LYPD6BQ8NI32 183 aa19.49■□□□□ 0.71
CAPNS1-215ENST00000628018 TRBV9A0A0B4J1U6 114 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 OR2J3O76001 311 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 YIF1AO95070 293 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 NDUFB8O95169 186 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 TSPAN15O95858 294 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 LINC00869P0C866 280 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 RAB2AP61019 212 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 ZNF616Q08AN1 781 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 RBMS3Q6XE24 437 aaKnown RBP19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 STPG3Q8N7X2 389 aa19.48■□□□□ 0.71
CAPNS1-215ENST00000628018 ANK3Q12955 4377 aaKnown RBP19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 TCRBV4S1A1TA0A5B7 111 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 CYSRT1A8MQ03 144 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 CD99P14209 185 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 M6PRP20645 277 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 PPIFP30405 207 aaKnown RBP19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 B2MP61769 119 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 SCGB2A2Q13296 93 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 CYP2G1PQ6ZSU1 146 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 RPP25LQ8N5L8 163 aaKnown RBP19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 NOL4LQ96MY1 436 aaPredicted RBP19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 SLC39A9Q9NUM3 307 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 FBXL7Q9UJT9 491 aa19.47■□□□□ 0.71
CAPNS1-215ENST00000628018 SONP18583 2426 aaKnown RBP19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 ZFP92A6NM28 416 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 ACOT6Q3I5F7 207 aaPredicted RBP19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 BPIFCQ8NFQ6 507 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 OR10G4Q8NGN3 311 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 OR10G9Q8NGN4 311 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 OR10G7Q8NGN6 311 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 TRGV9Q99603 122 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 HRH4Q9H3N8 390 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 ZNF726P1Q15940 193 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 DUX5Q96PT3 197 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 PRSS22Q9GZN4 317 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 NPFFR1Q9GZQ6 430 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 ZNF355PQ9NSJ1 428 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 PFDN2Q9UHV9 154 aa19.46■□□□□ 0.71
CAPNS1-215ENST00000628018 MFSD2BA6NFX1 497 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 CLN5O75503 358 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 BRI3O95415 125 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 GATA2P23769 480 aaPredicted RBP19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 ZNF90Q03938 601 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 GCSAMLQ5JQS6 135 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 COMMD7Q86VX2 200 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 VN1R17PQ8TDU5 208 aa19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 RCC1LQ96I51 464 aaKnown RBP19.45■□□□□ 0.7
CAPNS1-215ENST00000628018 TEX46H3BTG2 121 aa19.44■□□□□ 0.7
CAPNS1-215ENST00000628018 H2AFB1P0C5Y9 115 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms