RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 AREGP15514 252 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 TMEM11P17152 192 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 GCSAMLQ5JQS6 135 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 TMEM68Q96MH6 324 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 TMPRSS5Q9H3S3 457 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
LDB3-208ENST00000623007 SEPSECSQ9HD40 501 aaKnown RBP13.04□□□□□ -0.32
LDB3-208ENST00000623007 NPFFO15130 113 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 COX7A2P2O60397 106 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 CTRB1P17538 263 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 CTRB2Q6GPI1 263 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 OR2T6Q8NHC8 308 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 TCEAL7Q9BRU2 100 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 DOK5Q9P104 306 aa13.03□□□□□ -0.32
LDB3-208ENST00000623007 SMG1Q96Q15 3661 aaKnown RBP13.02□□□□□ -0.32
LDB3-208ENST00000623007 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 FOLR2P14207 255 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 ATF4P18848 351 aaPredicted RBP13.02□□□□□ -0.32
LDB3-208ENST00000623007 RND2P52198 227 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.32
LDB3-208ENST00000623007 AKIRIN2Q53H80 203 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 C10orf113Q5VZT2 155 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 CST9LP1Q5W188 147 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 OR4X1Q8NH49 305 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 C17orf50Q8WW18 174 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 ARPC1AQ92747 370 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 RPUSD4Q96CM3 377 aaKnown RBP13.02□□□□□ -0.32
LDB3-208ENST00000623007 BBC3Q96PG8 261 aaPredicted RBP13.02□□□□□ -0.32
LDB3-208ENST00000623007 SLC25A33Q9BSK2 321 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 TNFRSF19Q9NS68 423 aa13.02□□□□□ -0.32
LDB3-208ENST00000623007 PLP1P60201 277 aa13.02□□□□□ -0.33
LDB3-208ENST00000623007 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.33
LDB3-208ENST00000623007 C20orf24Q9BUV8 137 aa13.02□□□□□ -0.33
LDB3-208ENST00000623007 PARLQ9H300 379 aa13.02□□□□□ -0.33
LDB3-208ENST00000623007 RNF24Q9Y225 148 aa13.02□□□□□ -0.33
LDB3-208ENST00000623007 A0A1W2PRE2 83 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
LDB3-208ENST00000623007 OR2C1O95371 312 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 HLA-DRB1P01911 266 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 REG1AP05451 166 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
LDB3-208ENST00000623007 SAA4P35542 130 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 PERPQ96FX8 193 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 SSX3Q99909 188 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 WNT10AQ9GZT5 417 aa13.01□□□□□ -0.33
LDB3-208ENST00000623007 PSMB11A5LHX3 300 aa13□□□□□ -0.33
LDB3-208ENST00000623007 COLCA2A8K830 154 aa13□□□□□ -0.33
LDB3-208ENST00000623007 B4DSR2 109 aa13□□□□□ -0.33
LDB3-208ENST00000623007 CLDN34H7C241 214 aa13□□□□□ -0.33
LDB3-208ENST00000623007 FCN1O00602 326 aa13□□□□□ -0.33
LDB3-208ENST00000623007 TGOLN2O43493 480 aa13□□□□□ -0.33
LDB3-208ENST00000623007 S100A7P31151 101 aa13□□□□□ -0.33
LDB3-208ENST00000623007 SSBP2P81877 361 aaPredicted RBP13□□□□□ -0.33
LDB3-208ENST00000623007 FLI1Q01543 452 aaPredicted RBP13□□□□□ -0.33
LDB3-208ENST00000623007 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
LDB3-208ENST00000623007 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
LDB3-208ENST00000623007 RASL11BQ9BPW5 248 aa13□□□□□ -0.33
LDB3-208ENST00000623007 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 PRB1P04280 392 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 MLANAQ16655 118 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 BTF3L4Q96K17 158 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 MLXQ9UH92 298 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 IGSF10Q6WRI0 2623 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 KALRNO60229 2985 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 TRAV20A0A0B4J274 112 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 IGHV1-69DA0A0B4J2H0 117 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 IGHV4-61A0A0C4DH41 118 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 I3L2K1 104 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 OR7C2O60412 319 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 MSMBP08118 114 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 CD99P14209 185 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 CX3CL1P78423 397 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 MIR17HGQ75NE6 70 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 C11orf52Q96A22 123 aa12.99□□□□□ -0.33
LDB3-208ENST00000623007 CENPVL3A0A0U1RRI6 287 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 A0A1W2PRD5 423 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 A0A1W2PRF3 423 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 A0A1W2PRM7 423 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 PPP1R2P9O14990 202 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 HYPMO75409 117 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 MFAP2P55001 183 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 TMEM37Q8WXS4 190 aa12.98□□□□□ -0.33
LDB3-208ENST00000623007 UBE2G2P60604 165 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 ZNF674Q2M3X9 581 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 DYNAPQ8N1N2 210 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 OR51G1Q8NGK1 321 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 TXN2Q99757 166 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 MEGF9Q9H1U4 602 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 GAR1Q9NY12 217 aaKnown RBP12.97□□□□□ -0.33
LDB3-208ENST00000623007 BAHCC1Q9P281 2608 aa12.97□□□□□ -0.33
LDB3-208ENST00000623007 RNF224P0DH78 156 aa12.96□□□□□ -0.33
LDB3-208ENST00000623007 RAB5BP61020 215 aa12.96□□□□□ -0.33
LDB3-208ENST00000623007 KLK9Q2XQG4 91 aa12.96□□□□□ -0.33
LDB3-208ENST00000623007 LRRC75A-AS1Q8N1F1 130 aa12.96□□□□□ -0.33
LDB3-208ENST00000623007 Q8N9W7 124 aa12.96□□□□□ -0.33
LDB3-208ENST00000623007 BEX4Q9NWD9 120 aaPredicted RBP12.96□□□□□ -0.33
LDB3-208ENST00000623007 KLK9Q9UKQ9 250 aa12.96□□□□□ -0.33
LDB3-208ENST00000623007 DOPEY1Q5JWR5 2465 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms