RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 LRTM2Q8N967 370 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 PTTG2Q9NZH5 202 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 MRPL27Q9P0M9 148 aaKnown RBP10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 TMED3Q9Y3Q3 217 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 C9orf170A2RU37 121 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 OR4E1P0C645 316 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 NPY1RP25929 384 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 FCGR2BP31994 310 aaPredicted RBP10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 COQ8AQ8NI60 647 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 DTD1Q8TEA8 209 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 WDR12Q9GZL7 423 aaKnown RBP10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 RBKSQ9H477 322 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 BATF3Q9NR55 127 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
PCDHGC3-208ENST00000622836 PLA2G10O15496 165 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 ZNF207O43670 478 aaKnown RBP10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 SCAF4O95104 1147 aaKnown RBP10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 CD81P60033 236 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 C2orf83Q53S99 150 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 GGNBP1Q5YKI7 109 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 ETFRF1Q6IPR1 90 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 RBPMS2Q6ZRY4 209 aaKnown RBP10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 LYG2Q86SG7 212 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 RNASEH2CQ8TDP1 164 aaKnown RBP10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 ASCL2Q99929 193 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 C20orf85Q9H1P6 137 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 MLXQ9UH92 298 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 U3KQ87 197 aa10.56□□□□□ -0.72
PCDHGC3-208ENST00000622836 C15orf62A8K5M9 175 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 MED6O75586 246 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 IFNA21P01568 189 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 IFNA4P05014 189 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 FRMD6-AS1P0C7T7 363 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 SLC25A6P12236 298 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 DHRS2Q13268 280 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 MLANAQ16655 118 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 PVRIGQ6DKI7 326 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 C11orf87Q6NUJ2 197 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 TMEM61Q8N0U2 210 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 TUBA4BQ9H853 241 aa10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 PAIP2BQ9ULR5 123 aaKnown RBP10.55□□□□□ -0.72
PCDHGC3-208ENST00000622836 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 K7EMT4 169 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 CLN5O75503 358 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 ADAP1O75689 374 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 TMEM50AO95807 157 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 TCRBP04435 133 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 IAPPP10997 89 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 SLC25A4P12235 298 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 ZNF846Q147U1 533 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 MZT2BQ6NZ67 158 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 ZNF600Q6ZNG1 722 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 Q8N1Y9 231 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 OR4X1Q8NH49 305 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 NEURL2Q9BR09 285 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
PCDHGC3-208ENST00000622836 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 TRAV14DV4A0A0A6YYC5 116 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 FAM240BA0A1B0GVZ2 78 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 PITX3O75364 302 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 NHLRC4P0CG21 123 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 RND2P52198 227 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 LAMTOR1Q6IAA8 161 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 SLC16A13Q7RTY0 426 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 OR52B4Q8NGK2 314 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 NUDT15Q9NV35 164 aa10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 MRPL36Q9P0J6 103 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 PUS1Q9Y606 427 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHGC3-208ENST00000622836 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 WRBO00258 174 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 CD7P09564 240 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 BMI1P35226 326 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 ATP5IP56385 69 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 RAB11AP62491 216 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 RPP30P78346 268 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 PRSS54Q6PEW0 395 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 TOMM20LQ6UXN7 152 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 TMEM116Q8NCL8 245 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 TMEM170AQ8WVE7 144 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 ACY3Q96HD9 319 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 OR10C1Q96KK4 312 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 CIB3Q96Q77 187 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 RHPN1-AS1Q9BWJ2 59 aa10.52□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGHV7-4-1A0A0J9YVY3 117 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 SYNGR2O43760 224 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 SCGB1D2O95969 90 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 OR10J1P30954 320 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms