RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ATP5IP56385 69 aaPredicted RBP10.58□□□□□ -0.72
MSH6-215ENST00000622629 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 OR52E5Q8NH55 327 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 SNRNP40Q96DI7 357 aaKnown RBP10.58□□□□□ -0.72
MSH6-215ENST00000622629 CORTO00230 105 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 SERF1AO75920 110 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 ADMP35318 185 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 CD69Q07108 199 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 TEX50A0A1B0GTY4 177 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
MSH6-215ENST00000622629 NHLH1Q02575 133 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 MEF2CQ06413 473 aaPredicted RBP10.57□□□□□ -0.72
MSH6-215ENST00000622629 GOLT1AQ6ZVE7 132 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 GBGT1Q8N5D6 347 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 CACNA1AO00555 2505 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 GPX4P36969 197 aaPredicted RBP10.57□□□□□ -0.72
MSH6-215ENST00000622629 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 FAM19A2Q8N3H0 131 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 CACNG8Q8WXS5 425 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 TLN1Q9Y490 2541 aaKnown RBP10.57□□□□□ -0.72
MSH6-215ENST00000622629 A0A1W2PNU3 283 aaPredicted RBP10.57□□□□□ -0.72
MSH6-215ENST00000622629 ORM1P02763 201 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 AMY1AP04745 511 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 BMI1P35226 326 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
MSH6-215ENST00000622629 Q6ZPA2 131 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 BPIFA4PQ86YQ2 179 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 UBTD1Q9HAC8 227 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 ELOVL5Q9NYP7 299 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 RAXQ9Y2V3 346 aa10.57□□□□□ -0.72
MSH6-215ENST00000622629 CD33P20138 364 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 KRTAP27-1Q3LI81 207 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 CEP295Q9C0D2 2601 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 PF4V1P10720 104 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 APOBEC3AP31941 199 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 GNG5P63218 68 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 RELQ04864 619 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 MBD3L4A6NDZ8 208 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 MBD3L3A6NE82 208 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 MBD3L5A6NJ08 208 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 PEX7O00628 323 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 CD24P25063 80 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 MAS1LP35410 378 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 RIGQ13278 110 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 MBD3L2Q8NHZ7 208 aaPredicted RBP10.56□□□□□ -0.72
MSH6-215ENST00000622629 PIMREGQ9BSJ6 248 aa10.56□□□□□ -0.72
MSH6-215ENST00000622629 SSX8Q7RTT4 187 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 FAM90A9PA6NNJ1 464 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 B9A039 149 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 PPOXP50336 477 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 FAM208BQ5VWN6 2430 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 SPTBN4Q9H254 2564 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 ACACBO00763 2458 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 J3KRW8 73 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
MSH6-215ENST00000622629 FCER1GP30273 86 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 TCTAP57738 103 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 SPATA45Q537H7 98 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 SRSF12Q8WXF0 261 aaKnown RBP10.55□□□□□ -0.72
MSH6-215ENST00000622629 NEU1Q99519 415 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 WNT10AQ9GZT5 417 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 CLEC5AQ9NY25 188 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 BET1LQ9NYM9 111 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 TBL2Q9Y4P3 447 aaKnown RBP10.55□□□□□ -0.72
MSH6-215ENST00000622629 YTHDF2Q9Y5A9 579 aaKnown RBP10.55□□□□□ -0.72
MSH6-215ENST00000622629 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
MSH6-215ENST00000622629 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 IL4P05112 153 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 CD99P14209 185 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 C11orf42Q8N5U0 333 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 RNASE6Q93091 150 aaKnown RBP10.54□□□□□ -0.72
MSH6-215ENST00000622629 C1RLQ9NZP8 487 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
MSH6-215ENST00000622629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
MSH6-215ENST00000622629 TNFSF13O75888 250 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 WISP2O76076 250 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 IGHV2-5P01817 119 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 CA7P43166 264 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
MSH6-215ENST00000622629 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 OR4A5Q8NH83 315 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 IGHV3OR16-8A0A075B7F1 116 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
MSH6-215ENST00000622629 RPLP1P05386 114 aaKnown RBP10.54□□□□□ -0.72
MSH6-215ENST00000622629 NBL1P41271 181 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 ZNF134P52741 427 aa10.54□□□□□ -0.72
MSH6-215ENST00000622629 LIPFP07098 398 aa10.53□□□□□ -0.72
MSH6-215ENST00000622629 WT1P19544 449 aaPredicted RBP10.53□□□□□ -0.72
MSH6-215ENST00000622629 ZCCHC14Q8WYQ9 949 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms