RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZNF506Q5JVG8 444 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 CYP2G1PQ6ZSU1 146 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 IQCF2Q8IXL9 164 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 MRPL36Q9P0J6 103 aaKnown RBP16.99■□□□□ 0.31
SPAST-204ENST00000621856 DMRT1Q9Y5R6 373 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 IGHV7-81A0A0B4J1V7 117 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 MT-CO2P00403 227 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 CRYGCP07315 174 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 PRSS57Q6UWY2 283 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 THAP8Q8NA92 274 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 OR1L6Q8NGR2 347 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 SSX3Q99909 188 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 SMDT1Q9H4I9 107 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 SOX21Q9Y651 276 aaPredicted RBP16.99■□□□□ 0.31
SPAST-204ENST00000621856 ABCA12Q86UK0 2595 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 LOC102723971A0A1B0GUV8 181 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 FBP1P09467 338 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 IGHV4-31P0DP07 118 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 GATA2P23769 480 aaPredicted RBP16.98■□□□□ 0.31
SPAST-204ENST00000621856 ICAM4Q14773 271 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 RXFP4Q8TDU9 374 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 CARHSP1Q9Y2V2 147 aaKnown RBP16.98■□□□□ 0.31
SPAST-204ENST00000621856 CR1P17927 2039 aa16.98■□□□□ 0.31
SPAST-204ENST00000621856 SCO1O75880 301 aa16.97■□□□□ 0.31
SPAST-204ENST00000621856 RHOBP62745 196 aa16.97■□□□□ 0.31
SPAST-204ENST00000621856 TMEM249Q2WGJ8 235 aa16.97■□□□□ 0.31
SPAST-204ENST00000621856 C10orf91Q5T1B1 145 aa16.97■□□□□ 0.31
SPAST-204ENST00000621856 TMEM219Q86XT9 240 aa16.97■□□□□ 0.31
SPAST-204ENST00000621856 SLC35B3Q9H1N7 401 aa16.97■□□□□ 0.31
SPAST-204ENST00000621856 TCRBV4S1A1TA0A5B7 111 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 NPIPB5A8MRT5 1133 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 BCL2P10415 239 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 KHDC3LQ587J8 217 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 ASPHD1Q5U4P2 390 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 RBM14Q96PK6 669 aaKnown RBP16.96■□□□□ 0.31
SPAST-204ENST00000621856 HSPB9Q9BQS6 159 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 TMPRSS5Q9H3S3 457 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 MOB4Q9Y3A3 225 aa16.96■□□□□ 0.31
SPAST-204ENST00000621856 RBMS3Q6XE24 437 aaKnown RBP16.96■□□□□ 0.3
SPAST-204ENST00000621856 KRTAP1-3Q8IUG1 177 aa16.96■□□□□ 0.3
SPAST-204ENST00000621856 PIFOQ8TCI5 191 aa16.96■□□□□ 0.3
SPAST-204ENST00000621856 NAV2Q8IVL1 2488 aa16.96■□□□□ 0.3
SPAST-204ENST00000621856 IGKV1D-37A0A075B6S9 117 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 I3L2K1 104 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 GUCA2BQ16661 112 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 TTC9CQ8N5M4 171 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 C5orf56Q8N8D9 126 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 TMEM116Q8NCL8 245 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 TNFRSF19Q9NS68 423 aa16.95■□□□□ 0.3
SPAST-204ENST00000621856 HSPB1P04792 205 aaKnown RBP16.94■□□□□ 0.3
SPAST-204ENST00000621856 SVBPQ8N300 66 aa16.94■□□□□ 0.3
SPAST-204ENST00000621856 H3BUX3 64 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 SRP19P09132 144 aaKnown RBP16.93■□□□□ 0.3
SPAST-204ENST00000621856 EGR2P11161 476 aaPredicted RBP16.93■□□□□ 0.3
SPAST-204ENST00000621856 SELENOTP62341 195 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 ZNF90Q03938 601 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 PMS2P11Q13670 270 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 FAM78BQ5VT40 261 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 SPATA31B1PQ5VZV4 182 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 SLC35E3Q7Z769 313 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 VAX2Q9UIW0 290 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 SH2D7A6NKC9 451 aaPredicted RBP16.93■□□□□ 0.3
SPAST-204ENST00000621856 PSMB3P49720 205 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 CEBPGP53567 150 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 LY6EQ16553 131 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 OR5T1Q8NG75 326 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 TRGV9Q99603 122 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 SEPSECSQ9HD40 501 aaKnown RBP16.93■□□□□ 0.3
SPAST-204ENST00000621856 MANBALQ9NQG1 85 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 VPS13CQ709C8 3753 aa16.93■□□□□ 0.3
SPAST-204ENST00000621856 K7EIM0 57 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 ATP6V0E1O15342 81 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 CXorf1O96002 111 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 STAG3L2P0CL84 134 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 STAG3L3P0CL85 134 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 ARL14EPLP0DKL9 152 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 SGMS2Q8NHU3 365 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 C19orf24Q9BVV8 132 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 FUT9Q9Y231 359 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 ABCA1O95477 2261 aa16.92■□□□□ 0.3
SPAST-204ENST00000621856 BPIFB3P59826 476 aa16.91■□□□□ 0.3
SPAST-204ENST00000621856 ECSCRQ19T08 205 aa16.91■□□□□ 0.3
SPAST-204ENST00000621856 ATRAIDQ6UW56 229 aa16.91■□□□□ 0.3
SPAST-204ENST00000621856 UNQ5815/PRO19632Q6UWF5 114 aa16.91■□□□□ 0.3
SPAST-204ENST00000621856 MIR17HGQ75NE6 70 aa16.91■□□□□ 0.3
SPAST-204ENST00000621856 IGLV11-55A0A075B6I3 123 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 COX7A2P2O60397 106 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 TAGLN2P37802 199 aaKnown RBP16.9■□□□□ 0.3
SPAST-204ENST00000621856 SOHLH1Q5JUK2 328 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 CYB5R2Q6BCY4 276 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 OR1L4Q8NGR5 311 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 OR4X1Q8NH49 305 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 TMUB1Q9BVT8 246 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 GSX1Q9H4S2 264 aaPredicted RBP16.9■□□□□ 0.3
SPAST-204ENST00000621856 DOK5Q9P104 306 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 APCP25054 2843 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 MAP1AP78559 2803 aaPredicted RBP16.9■□□□□ 0.3
SPAST-204ENST00000621856 A6NDX4 124 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 SPNS3Q6ZMD2 512 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 NANPQ8TBE9 248 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms